Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00322 ATGGCTGATTCCAGGGATCTTCCTCCTCGCCGCGGAGCAGGAATAGTCAAAAGTATACGCTTGGAGAACTTCATGTGTCACAGCAACTTGTATATTGAGTTTGGCGAGTGGCTCAATTTCATTACAGGGCAGAACGGAAGTGGTAAGAGTGCTATACTGACTGCTTTATGTGTTGCATTCGGCTGTCGAGCTAGAGGCACCCAAAGGGCGTCGACGTTGAAGGATTTTATTAAAACTGGTTGCAGTCATGCTGTCATCCAAGTTGAAATGGAAAATTCTGGGGAGGATGCTTTTAAGCCTGGAATATATGGTAATGTTATAATCATAGAGAGAAGGATTTCCGAAGCCTCAGGTGCCATTGTTTTGAAAGATTCTCAAGGAAAGAAGGTTTCCAGCCGGAGGGATGAACTACGAGAGCTTGTAGACCATTTTAATATAGATGTTGAGAACCCGTGTGTGATAATGAGTCAGGACAAAAGTAGAGAGTTCCTGCATTCTGGGAATGACAAAGACAAATTCAAGTTCTTCTTCAAAGCTACTCTTCTCCAGCAAGTTGATGATCTGTTGAAAAACATTTTTCATCAACTGAGATCTGCGAATGCACTTGTTGATGACTTGGAGTCTACCATACGACCTGTGGAGAAGGAGCTAAATGAGCTGCAAGGAAAAATTAAAAACATGGAGCACGTAGAAGAAATCTATCAACAAGTCCAACAGTTAAAGAAGAAGCTTGCGTGGTCATGGGTATATGATGTAGACAAGCAGCTTCTGGAGCAAAGTGTAAAAATAGGAAAGCTCAAAGATCGCATCCCTATTTGTCGAGCAAAAATTGATCATCAACAGGGTCTGGCAGAAAAATTAAGAGAACGCTTTATCGAGAAGAAGGCTCAAATTGCAAGCATGATGGAGAAAACTTCGGAAGTTAGAAGACTGAAGGACGAATTGCAAGAAACCCTTTCCTTGGCAACAAGAGAGAAGCTCGGGCTTGAAGAGGAGCATGGCCGCAAAATGAACTACATTCAAAAGATGGCGAAACGTGTTAGGCTGCTTGAGCAACAAGTTCACGATGTTCATGAGCAGCACATAAGAAATACACAGGTATCCCTTTCTCTTGGATTTGCTGAAGAATCTGAAATTGAGGAAAAGTTGAAGGAACTCGAATTGGAGACTGAAGCTGCTAAGTCAACAGTCATGAGGTTATTTACTTATTTGCTTCGTAGGTCCGTTTTAAAAAAAAGAATTGTAGTCCATCGTATTGAATCAAGTTACAGGTTAAAGGAGGAGGAAAATGGCTTACTGGATAGTCTAAACTGTGGGAGAAGTGAAATAAAAAAGATTGCTGAAGAGATTGAAGGTTATGAAAAAAAGCATAATGAATTTTCACGCTCTATTCGAGAGCTAAGGCAGCATCAAACAAACAAGGTTACAGCTTTTGGAGGTGATAGAGTCATTCAATTATTACGTGTGATTGAGAGGCAAAATCGAAGATTCAAGAAACCTCCCATTGGTCCAATTGGTGCCCATCTGAATTTGGTCAATGGTGACGTGTGGGCTCCTGCTGTTGAAAATGCCATTGGGAGGTTGCTCAATGCATTCATCGTGACCAATCATCAAGATTCTCTTCTTTTGAGAGGATGTGCTAATGAAGCCAATTATAGGCAACTCCCAATTATCATCTATGACTTTTCAAGACCACTGTTAGATATTCCAGCTCACATGCTTCCTCAAACAAAGCACCCTACAACCCTTTCAGTGATTCATTCTGAAAACCATACTGTCATCAATGTTTTGATAGATAAGGGTGATGCTGAGAGGCAAGTGCTTGTTAAAGATTATGATGTGGGTAAATCAGTCACGTTTGACCAACGGATCAAAAATCTCAAGGAGGTCTTTACGTTAGATGGATATAAAATGTTTTCTCGTGGTTCTGTTCAGACAATTCTTCCCCCAGTTAAAAGACCTAGAAGTGGCAGACTTTGTAGTTCTTTTGATGACCAGATTAAAAGTCTTGAAAAAGATACATCAAACATGAAGGAAGAAGCTGAGCAATGTAGGAAGAGGAAGAGAGCTGCAGAAGAACAACTTCGGGGTCTTGAAGAGAACCTATGCAATGCCAAGCGGAGATGTCAAAACGCGGAACGCATTTTAATGTCCAAAAATTTGGAGCTACAAGATTTACGGAAGTCACAGGTTGCTGGAACTAGTTCATTACCTTCATCAAACGTTGACGAGCTTCATCAAGAAATTTCTAAAATCAAAGAGGAGATGGAAGAGAATAAATCGCTTCTGGAAAAGTTCAGAGTGAGAATGAAAGATGCGGAAGCCAAGGCAAAAGATCTTAAACTATCATTTGAGGATCTGTGTGAGTCAGCGAAAGGAGAAGTTGATGCATATGAAGAAGCCGAGAGAGATATGTTGCAGATTGAACGAGATCTGCATTCTGCCGAAAAGGAGATGAATCATTATGAAGGTATTATGACTAACAAGGTCCTGTTTGATATCAAAGAGGCAGAGAGACAATATGAGGAGCTCGAGCGCCATCGTAAGGAGAGTTACAGTAAGGCTTCAATAATATCTCCTGAGAGTGAAATTGAGGCTTTAGGTGATTGGGATGGGAGCACACCTGAACAACTCAGTGCACAATTAAACAGGCTAAATCAGAGACTTAGTAACGAGACCCGACAATGTTCTGAATCTCTGGAAGACTTGAGGATGATGTATGAGAAAAAGGAGCGTACAATTATAAGAAAACAACAGACTTACAAAAGTTTTAGAGAGAAGTTGAATGCTTGCCAGAAAGCTCTTGAGCTTCGGTGGAACAAGTTTGAAAGGAATGCTAATCTTTTGAAGCGTCAATTGACTTGGCAATTTAATGGCCATTTAAGAAAAAAAGGGATCAGTGGACATATAAAAATCAATTACGAGGAAAAGACCCTCTCGGTTGAGGTGAAGATGCCCCAAGATGCATCCAGCAGTTCTGTTCGTGATACCCGTGGACTTTCAGGTGGAGAACGGTCATTTTCCACTCTATGCTTCACTTTGGCATTACACGAAATGACAGAAGCCCCATTTCGAGCAATGGATGAGTTTGATGTGTTTATGGATGCAGTAAGTCGGAAAATTAGCTTAGACACTCTTGTGGATTTTGCATTGTCACAAGGTTCCCAATGGATATTTATCACACCTCATGATATCGGCGTGGTAAAACAAGGAGAACGAATCAAGAAGCAGCAAATGGCAGCTCCTCGATCATGA 3255 41.04 MADSRDLPPRRGAGIVKSIRLENFMCHSNLYIEFGEWLNFITGQNGSGKSAILTALCVAFGCRARGTQRASTLKDFIKTGCSHAVIQVEMENSGEDAFKPGIYGNVIIIERRISEASGAIVLKDSQGKKVSSRRDELRELVDHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQVDDLLKNIFHQLRSANALVDDLESTIRPVEKELNELQGKIKNMEHVEEIYQQVQQLKKKLAWSWVYDVDKQLLEQSVKIGKLKDRIPICRAKIDHQQGLAEKLRERFIEKKAQIASMMEKTSEVRRLKDELQETLSLATREKLGLEEEHGRKMNYIQKMAKRVRLLEQQVHDVHEQHIRNTQVSLSLGFAEESEIEEKLKELELETEAAKSTVMRLFTYLLRRSVLKKRIVVHRIESSYRLKEEENGLLDSLNCGRSEIKKIAEEIEGYEKKHNEFSRSIRELRQHQTNKVTAFGGDRVIQLLRVIERQNRRFKKPPIGPIGAHLNLVNGDVWAPAVENAIGRLLNAFIVTNHQDSLLLRGCANEANYRQLPIIIYDFSRPLLDIPAHMLPQTKHPTTLSVIHSENHTVINVLIDKGDAERQVLVKDYDVGKSVTFDQRIKNLKEVFTLDGYKMFSRGSVQTILPPVKRPRSGRLCSSFDDQIKSLEKDTSNMKEEAEQCRKRKRAAEEQLRGLEENLCNAKRRCQNAERILMSKNLELQDLRKSQVAGTSSLPSSNVDELHQEISKIKEEMEENKSLLEKFRVRMKDAEAKAKDLKLSFEDLCESAKGEVDAYEEAERDMLQIERDLHSAEKEMNHYEGIMTNKVLFDIKEAERQYEELERHRKESYSKASIISPESEIEALGDWDGSTPEQLSAQLNRLNQRLSNETRQCSESLEDLRMMYEKKERTIIRKQQTYKSFREKLNACQKALELRWNKFERNANLLKRQLTWQFNGHLRKKGISGHIKINYEEKTLSVEVKMPQDASSSSVRDTRGLSGGERSFSTLCFTLALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALSQGSQWIFITPHDIGVVKQGERIKKQQMAAPRS 1084
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1788256 1800519 - Carg08022-RA Car04g00322 145747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00322 1084 Pfam RecF/RecN/SMC N terminal domain 16 1074 IPR003395 -
Car04g00322 1084 Coils Coil 284 332 - -
Car04g00322 1084 Coils Coil 667 729 - -
Car04g00322 1084 Coils Coil 798 825 - -
Car04g00322 1084 Coils Coil 742 790 - -
Car04g00322 1084 Coils Coil 203 230 - -
Car04g00322 1084 Coils Coil 376 396 - -
Car04g00322 1084 Coils Coil 827 854 - -
Car04g00322 1084 Coils Coil 340 360 - -
Car04g00322 1084 Coils Coil 882 920 - -
Car04g00322 1084 Coils Coil 436 470 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00322 Car-Chr4:1788256 Car17g00926 Car-Chr17:7591702 3.99E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00322 K22804 - csv:101208493 1801.56