Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00323 ATGAAAACAGCTTCCAGTTTCCTGTTTTTGATCTCTGCTGTTCTTTTGATCATCATCTCTTTTCTTCTTTCTGCAACTTCTTCAACTCCAACTGTTTTGCCCCTTCAACTTCTCTCTCTGCTTTCTATCAAATCCTCCATTAAAGATTCCTCTTCGAGCTTTCTTGATTGGGACCCTAAACCCACCTTCTCCAAAGCTGATTTTCATGACCCGATTTGGTGTTCTTGGTCGGGAGTTCGATGTGATCAGAACTCGCCGGAAATTACCTCCTTGGATTTGTCTCGTCGGAATCTCACTGGGTTTATTCCCTCTGAAATTAAGTACTTAACGAGCTTAGTTTATTTGAATTTGAGTGGTAATAGCTTTCTTGGGCCGTTCCCCACCGCCATTTTTGAGCTATCTCAGCTTACGACTCTTGATATTAGTCATAATATCTTCACCTCCACTTTCCCACCTGGGATTTCCAAGCTTAAGTTCTTGAATGTTTTCGATGCCTACAGTAACAACTTCACTGGTCCGTTACCGCCAGAATTCGCACATCTCCGGTTCCTTGAATGGCTCAACCTCGGTGGAAGCTACTTTAATGGCAGTATTCCGGCGAGTTATGGCGGTTTGTCACGGTTGAAGTATTTGCATTTGGCTGGAAATTCTCTTGATGGTCAAATTCCAGGGCAACTAGCGTATTTAACCAAACTCGAGAGAATGGAAATCGGTTACAATACCTTCTCCGGCGGGATTCCAGCGGAATTTCCATTGTTGTTGAATCTGAAATACTTGGATATTGCCGGAGCGAATCTCGCCGGGACTCTGCCGCTGGACATTGGAAACATGACGAAGCTGCAAAATCTGCTTCTCTTCAAGAATCGAATCACAGGCGAAATTCCTGAAAGTTTAGGGAAATTAGAAGCGCTCGAGGAGCTTGATTTGTCGGAGAATCAACTCACCGGAACGATTCCGTCGGATTTGTATAATCTGAAGGAATTAAGAGAGCTGAGTTTGATGGCGAACGATCTGAGTGGGGAAATTCCACAAGCACTTGGCGATCTTCCAAATCTCGCCAGTTTGCGATTATGGAACAATTTGCTCACAGGTCCACTGCCTCAGAATCTCGGCTCGAACGAGAAGTTACTGCAAGTCGACGTGTCGTCGAATCAACTCTCCGGTCCGATTCCTCCAAATCTCTGCCATGGAAACAAGCTGTATAAGCTCATTCTGTTTTCCAACAAATTAGGGCACGAACTTCCCGCCTCTTTAACGAACTGCACGTCTCTCGTTCGTCTTCGAATCCAAAACAACTTCCTTAACGGCTCGATTCCTCACGGTTTCGGCATGTTGGAGAATCTGACATTCGCCGATTTCAGTAACAATAACTTCTCCGGCGAGATTCCGGCGGATTTTGGTAATGCGGTGAAGTTACAGTACTTGAACATTTCACAGAACGCCTTCGGAACTTCCTTACCGGAGAATATCTGGAACTCGACTAGCTTACAGATCTTCTCGGCGAGTTCTTCGAGAATCATCGGTAGCATCCCCGATTTTGTCGGGTGTAGATCTATCTACGAGATCGAACTCCAGGACAATAATTTAAACGGTAGTATTCCATGGACGTTCGGCCATTGCGAGAAGCTACTCACGCTGAATTTAAGCCGGAATTCGTTAACCGGCATTATTCCATGGGAGATTTCCACGCTGCCGTCGATTACCGCCATTGATCTGTCACGAAACTTCCTCACAGGTACAATCCCTTCAAATTTTCAAAACTGTAGCACAATCGAAAGCTTCGACGTATCGTACAACCAGCTCACCGGCCCCATTCCATCGACCGGAACAATCTTCCCGGGATTACACTCTTCTTCATTCATCGGCAACGACGGTCTCTGCGGCGAGATTCTAGCGAAACCCTGCGCCGTCGACGCGCTCTCCGATGGCGGGATAGAGGTCCGACAGCAGCAGCCACGGCGGACGACGGGAGCAATCGTATGGATAATGGCAGCGGCGTTTGGTATCGGACTGTTCGTATTAGTAGCCGGGACGAGGTGTTTTCAGACGCATTACAGCCGTCGATTCGGCGGTGGCGACGAGGAAACGGGACCGTGGAAACTAACCGCCTTTCAACGGTTGAACTTCACGGCGGAGAACGTGTTAGAGTGTATGTCAATGACGGATAAGATCCTGGGAATGGGGTCCACTGGGACGGTATATAAAGCGGAGATGCCAGGTGGCGAAATCATAGCGGTGAAGAAATTGTGGGGTAAATATAAAGAGAACATCCGACGGCGGAGAGGGGTTTTGGCGGAAGTGGAGGTACTGGGGAACGTGAGGCACAGGAACATAGTGAGATTGTTAGGGTGCTGCAGCAACAAGGAGTGTACGATGCTGCTCTACGAGTATATGCCAAATGGTAATTTGGACGATTTACTGCACGGTAAAAACAAGGGTGAAAATTTGGTGGCCGATTGGATAACTAGGTATAAAATTGCACTGGGTGTGGCACAGGGGATTTGTTATCTTCACCATGACTGTGATCCAGTCATCGTGCACCGCGATTTGAAGCCCAGTAATATTTTATTGGACGGTGAGATGGAGGCCAGAGTGGCGGATTTCGGCGTCGCTAAGTTGATCCAGACCGATGAGTCAATGTCGGTGATCGCTGGATCCTACGGCTACATTGCACCAGAATATGGCTACACGCTTCAAGTGGATGAAAAAAGTGATATTTATAGCTTTGGAGTTGTGTTGATGGAGATCGTGAGCGGGAAGAGGTCTGTGGATTCTGAATTTGGCGAGGGGAATAGCATTGTGGATTGGGTAAGATCCAAAATTAAGGTGAAAGATGGAGTGAATCAAGTTTTGGACAACGATGTCAGTGCGTCTTGTGCGTCTGTTAGAGAAGAAATGATACAAATGCTTCGTATTTCATTGCTTTGTACGAGCCGTAACCCTGCAGACCGACCGTCGATGCGTGATGTCGTTTTGATGCTACAACAAGCAAAACCCAAGAGAAAATTTCCTGGGAATCTTGTCACTGTTGAAGCTGATGTTCTCTTAGACCACAAGATAGTAGCCGAGTGTTAA 3075 46.96 MKTASSFLFLISAVLLIIISFLLSATSSTPTVLPLQLLSLLSIKSSIKDSSSSFLDWDPKPTFSKADFHDPIWCSWSGVRCDQNSPEITSLDLSRRNLTGFIPSEIKYLTSLVYLNLSGNSFLGPFPTAIFELSQLTTLDISHNIFTSTFPPGISKLKFLNVFDAYSNNFTGPLPPEFAHLRFLEWLNLGGSYFNGSIPASYGGLSRLKYLHLAGNSLDGQIPGQLAYLTKLERMEIGYNTFSGGIPAEFPLLLNLKYLDIAGANLAGTLPLDIGNMTKLQNLLLFKNRITGEIPESLGKLEALEELDLSENQLTGTIPSDLYNLKELRELSLMANDLSGEIPQALGDLPNLASLRLWNNLLTGPLPQNLGSNEKLLQVDVSSNQLSGPIPPNLCHGNKLYKLILFSNKLGHELPASLTNCTSLVRLRIQNNFLNGSIPHGFGMLENLTFADFSNNNFSGEIPADFGNAVKLQYLNISQNAFGTSLPENIWNSTSLQIFSASSSRIIGSIPDFVGCRSIYEIELQDNNLNGSIPWTFGHCEKLLTLNLSRNSLTGIIPWEISTLPSITAIDLSRNFLTGTIPSNFQNCSTIESFDVSYNQLTGPIPSTGTIFPGLHSSSFIGNDGLCGEILAKPCAVDALSDGGIEVRQQQPRRTTGAIVWIMAAAFGIGLFVLVAGTRCFQTHYSRRFGGGDEETGPWKLTAFQRLNFTAENVLECMSMTDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKYKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNKECTMLLYEYMPNGNLDDLLHGKNKGENLVADWITRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYGYTLQVDEKSDIYSFGVVLMEIVSGKRSVDSEFGEGNSIVDWVRSKIKVKDGVNQVLDNDVSASCASVREEMIQMLRISLLCTSRNPADRPSMRDVVLMLQQAKPKRKFPGNLVTVEADVLLDHKIVAEC 1024
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1801546 1804867 - Carg08023-RA Car04g00323 145748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00323 1024 ProSiteProfiles Protein kinase domain profile. 719 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00323 1024 Pfam Leucine rich repeat 86 144 IPR001611 GO:0005515
Car04g00323 1024 Pfam Leucine rich repeat 518 575 IPR001611 GO:0005515
Car04g00323 1024 Pfam Leucine rich repeat 279 338 IPR001611 GO:0005515
Car04g00323 1024 Pfam Leucine rich repeat N-terminal domain 36 82 IPR013210 -
Car04g00323 1024 ProSitePatterns Protein kinases ATP-binding region signature. 725 748 IPR017441 GO:0005524
Car04g00323 1024 Pfam Protein kinase domain 722 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00323 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01469 Car-Chr2:9585363 Car04g00323 Car-Chr4:1801546 0 dispersed
Car04g00323 Car-Chr4:1801546 Car16g00765 Car-Chr16:4852458 0 dispersed
Car05g01174 Car-Chr5:11170894 Car04g00323 Car-Chr4:1801546 0 dispersed
Car16g00176 Car-Chr16:1007984 Car04g00323 Car-Chr4:1801546 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88765 PF00069 Pkinase 1.30E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00323 - - csv:101215776 1706.81