Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00329 ATGACCCAGATCCTCAATCTTGTTCTTGGAGTGGTTGCCATTGCAGTTGCGGCCATTATCATCTTCATCTTCTTGAAAAGAAGGGGAAAAGGGAAGGATGAATACAACGACACAGAGAGGAACCAGGAGAGGGAAAATGGGGAAGAAGAGAGAGAAGAATTGGTGAGTTTTCATGGCGGACAGGATCTTACCATTGTTGATATATTGGAAGCTCCAGGGGAAGTGATTGGAAAAGCCAGCCATGGAACTCTGTATAAGGCCTACCTGCAAGGAAGCAGCACTGTGAGGCTGCTGAGGTTCCTGAGGCCACTTTGTACTACTGGGTTTGAGGCTTTTGTTGCTCAGATTGAGTTCTTGGGTGACATTAGGCACCAAAATTTGGTGCCTCTTTTGGGATTCTATTCAGGTCCAAGAACAGAGAAGCTCCTGATTCATCCATTTTACAGGCATGGGAATCTGGCTCAGTTCATTAGAGATGGGAACAGCGACTCGCATCGATGGGCGGTAATAAACAAGATCTCGATTGGTATAGCGAAAGGATTGGATCATCTCCATACTGGTTTGCAAAAGCCAACAATCCATGGGAATCTACAGGCAAAGAATGTTCTTTTGGATCGAAACTACGAACCGTTGGTGTCGGATTTCGGCCTACATTTGCTGTTGAATTCATCTTCTGCACAAGAGTTGGTTGAAGCTTCAGCAGGCAATGGCTACAAAGCTCCTGAGTTGATCAAGATGAAGGATGCAAATGAGAAGAGCGATATCTATAGCTACGGCGTAATCTTATTTGAGTTACTGTCCGGAAAGGAACCGATCGACAAAAAAGCGAGTCCCGGTGAGGATTGTTACTTGCCTAACTTCATGAGAAATGCTGTTCTTGAGTATAGAATTGGAGAGCTGTTTCATCCTGAAATACTTGTATTTAGTAGCGTTGATGGAAACAGCGTCACTGAAGAAAAGATACTCAAATTCTTTCAGATTGCTATGGCTTGCTGTTCTCCTTCTCCAGCTCTTAGGCCAAGTATGAAGCAAGTGCTTCAAAAGCTCAACGAAATCAGCACATAA 1065 44.23 MTQILNLVLGVVAIAVAAIIIFIFLKRRGKGKDEYNDTERNQERENGEEEREELVSFHGGQDLTIVDILEAPGEVIGKASHGTLYKAYLQGSSTVRLLRFLRPLCTTGFEAFVAQIEFLGDIRHQNLVPLLGFYSGPRTEKLLIHPFYRHGNLAQFIRDGNSDSHRWAVINKISIGIAKGLDHLHTGLQKPTIHGNLQAKNVLLDRNYEPLVSDFGLHLLLNSSSAQELVEASAGNGYKAPELIKMKDANEKSDIYSYGVILFELLSGKEPIDKKASPGEDCYLPNFMRNAVLEYRIGELFHPEILVFSSVDGNSVTEEKILKFFQIAMACCSPSPALRPSMKQVLQKLNEIST 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1831271 1832817 - Carg08029-RA Car04g00329 145754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00329 354 ProSiteProfiles Protein kinase domain profile. 70 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00329 354 Pfam Protein tyrosine and serine/threonine kinase 74 349 IPR001245 GO:0004672|GO:0006468
Car04g00329 354 Coils Coil 32 52 - -
Car04g00329 354 MobiDBLite consensus disorder prediction 32 51 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00723 Car04g00329 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00723 Car-Chr2:5361186 Car04g00329 Car-Chr4:1831271 4.00E-98 dispersed
Car04g00329 Car-Chr4:1831271 Car15g01222 Car-Chr15:9541669 2.33E-100 dispersed
Car16g00185 Car-Chr16:1062096 Car04g00329 Car-Chr4:1831271 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88766 PF07714 PK_Tyr_Ser-Thr 6.40E-32 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00329 - - csv:101206706 559.296