Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00339 ATGCCTGGCATACCTCTCGTGACTCGTGAAACTTCCTGTTCCAGAAACGCAGATCAGATGTGCCGTGTAGAATCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCAGAAGAGAGCCTCTCACTTTACTGCAAGCCAGTTGAACTCTATAACATTCTTCAACGGCGTGCTATTAGAAATCCATTGTTTCTTCAAAGATGTTTAAGTTACAAAATAGAGACAGAACACAGGAGAAGGATCCAGATGACAATTTCAATTTCTAGGACTTTGGGTGGGGGTGGGCAGGCACATAATCTGTTTCCTGTGTATGTCATCTTGGGAAGATTAGTCTCGGACATTGCAGTTGCTGAGTTCTCTGGTGTATATCGCTTCAATCGAGCTTGCCTCTTAACTGGCATCAACAGAGGGGAATGCAGTTCTCAAGTTGTAGCTAATTTCATCCTCCCTGAAATTAACAAGCTAGCTGTGGAGGCAAAATCTGGGTCACTTGCTATATTATTTGTTAGCCACATTGGATCCACAAATACTTTGTCCGGAGTAGATTCAGTTGATGGGTCTCTATACATGGCATCTGTTCCTGTTGCAGGTTATTGCTTGTGGGGCAAGATACCTTTGGAATCACTTTACATTTCGTGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCAGAGATAATGTCAACTGTTGATATGCGCTCTTGTGTCCTTAAGACAAGTTGCTTGGATGGAGAGAAGTGTCTGGGATTTCAAATTCCATATAATTCCGATTCTATGCATACAGCACAGCAAGTACAAGTCACAATTTCTGCAGAGGAGTTTGGCGCTAGGGATAAATCTCCGTACGATTCATACACGTACAGTGTAATACCTTCCTCATCACTATCTCATATGATTCGGTTGAGGGCAGGAAATGTTATTTTCAATTATAGGTACTACAACAATAGATTGCAAAAAACTGAAGTAACTGAAGACTTCTCCTGTCCATTTTGCTTGATTAAATGTGCCAGCTTTAAGGGCTTGAGATGTCACTTGTTATCATTACATGATCTCTTCAACTTTGAATTTTGGGTAACTGAGGAGTATCAAGCTGTAAATGTTTCCACGAAGGCTGATGTTTGGCGGTCTGAGATCATCGCAGATGGCATTGATCCAAAGCAGCAGACATTCTTCTTCCGCTCTAGGCATCTCAGACGCAAAAAAGTTAAGAACGTAGTTCAAAGTGGAAAGCACATACATCCTTTTGTTGTAGAGTCTGAATATTCGGACAAGGCGGATGATGCTCAATCTAGCCAAGGTGAAAAAGCTCTAATATCAGGGCACAATATTGCGCCAACTATGCTTCAATTTGCCAAGACAAGAAAATTGTCGATCGAACGTGCAGACCCAAGACACTGTAACCTCTTGAGGAAGAGACAGTTCTTTCATTCCCATAGAGCTCAGCCGATGGCATTGGAACAAGTGTTATCCGATCGAGATAGTGAAGATGAAGTGGATGATGATGTTGCAGATCTTGAGGATAGGAGGATGCTCGATGATTTTGTTGATGTAACCAAGGACGAGAAGCAAATGATGCATATGTGGAATTCATTTGTCAGGAAGCAACGGGTACTTGCAGATGGCCATATCCCCTGGGCTTGTGAGGCGTTTTCACAATTACATGGACCAAACCTTGTCAAAACTCCAGCTCTTCTATGGTGCTGGAGATTGTTTATGATTAAGTTGTGGAACCATGGTCTACTTGATGCAAACTCCATGAACAGTTGTAACATTATTCTTGAAAGAATACATAGTGAAGCTTCCGATTCTAAAAGCTGA 1821 41.95 MPGIPLVTRETSCSRNADQMCRVESRVHLSEEEEIAAEESLSLYCKPVELYNILQRRAIRNPLFLQRCLSYKIETEHRRRIQMTISISRTLGGGGQAHNLFPVYVILGRLVSDIAVAEFSGVYRFNRACLLTGINRGECSSQVVANFILPEINKLAVEAKSGSLAILFVSHIGSTNTLSGVDSVDGSLYMASVPVAGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSTVDMRSCVLKTSCLDGEKCLGFQIPYNSDSMHTAQQVQVTISAEEFGARDKSPYDSYTYSVIPSSSLSHMIRLRAGNVIFNYRYYNNRLQKTEVTEDFSCPFCLIKCASFKGLRCHLLSLHDLFNFEFWVTEEYQAVNVSTKADVWRSEIIADGIDPKQQTFFFRSRHLRRKKVKNVVQSGKHIHPFVVESEYSDKADDAQSSQGEKALISGHNIAPTMLQFAKTRKLSIERADPRHCNLLRKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLLDANSMNSCNIILERIHSEASDSKS 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1902074 1913927 - Carg08039-RA Car04g00339 145764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00339 606 Pfam VEFS-Box of polycomb protein 457 592 IPR019135 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00339 Car16g00192 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00979 Car-Chr5:9317098 Car04g00339 Car-Chr4:1902074 1.44E-10 transposed
Car16g00192 Car-Chr16:1097222 Car04g00339 Car-Chr4:1902074 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00339 - - csv:101213607 1070.07