Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00360 ATGATGAAGCTGCAAACATATGCGGGAATTAGTTTCATTGCAACTATAGTGGTGATCTATCATGCCTTTAACAGTAGAGGCCAGTTCTACCCAGCGTTGGTCTATTTATCAACTTCCAAGATCAATCTAGTGCTTCTTCTCAACATGGGTTTAGTCCTCATGTGCATTTTGTGGCAGCTAACCAAAAAAATATTTCTTGGTTCTCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCGTGGAAGGAATTGATGGAAATCCTCTTTGCCATCACTATCTTTCGGCAAGATTTTTCTGTTGCATTCCTTGCTATGGTTACGGCTTTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCCGGATTGTTTCTTTCTTGGGTTTTCTCTTTGTTCTAGATAGTCTGTTTTTGTATAATTCGATAGGTTCTCTGATACAGACAAGGAAGGCTTCAGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCGACAACAGCCGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTGCTCATGGAGGGACAATGGGAAAAAAAGCCTGTCTATACATTCTACTTGGAGCTTATCCGAGACTTGCTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGACATATGGCGTGCCTTTGCACTTGATCCGTGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATTCGGTATAGAAAGATTACTTCAAACATGAATGATCGTTTTCCAGATGCAACACCTGAAGAACTCAATTCAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCAAAGAAACTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCCCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGGAGGTCATCAGGGATTGCAGTCTGATGCTAACCAACAAGGAACAGGAACCACAAGTTCGTCTGCACAAGGTTCGGGTGGTACAAGTGCTGCTGGTGATAGTTTGAGTCATCATCAGGCTAGAGTCCAGGCTGCTGCTGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTTGGGAACACATTAGCATGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTCAAAGACCATTGCTTGACTCCAACAATGTAGAACCGATTGGAGAACAAGCTCCCAATGAACAAGCACAATATTTTCCATTTACAGGCGGCCCTGCAAACCTGTCCTGTACTCAAATTCCCCAAAATCTTTTTGTTCCTTTTCAGCCACGAGAGGGCACTGTAAACAATACGGATGGATTGGGCAGTAGTCAAAATATATCAGGCTCACAGCTTGAATCTCAAGAAAGATTTCTTCAACAACAGATTGAGATCCTACAAGATCAGCTGCAACTTCTCCGTAAACTGAAAGTCGAGGAAAGCTCAATAGCAGGCGAGGCAGACAAGAAAGGGAAAAGCATAGCATCATCGTCGCAGTCATCATCTTCATCAGTTTCTGATTCTCATCCACCCGGAGAAACCGAAAGGACGGTGGGATAA 1671 42.55 MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQLTKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLAQKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYMILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYGVPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMTVAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTTSSSAQGSGGTSAAGDSLSHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQRPLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSCTQIPQNLFVPFQPREGTVNNTDGLGSSQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSIAGEADKKGKSIASSSQSSSSSVSDSHPPGETERTVG 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2034936 2040230 + Carg08060-RA Car04g00360 145785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00360 556 MobiDBLite consensus disorder prediction 342 378 - -
Car04g00360 556 Pfam Ring finger domain 291 330 IPR001841 -
Car04g00360 556 MobiDBLite consensus disorder prediction 529 548 - -
Car04g00360 556 MobiDBLite consensus disorder prediction 520 556 - -
Car04g00360 556 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Car04g00360 556 Coils Coil 486 513 - -
Car04g00360 556 MobiDBLite consensus disorder prediction 340 378 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00360 Car-Chr4:2034936 Car07g01160 Car-Chr7:7000942 5.68E-11 dispersed
Car02g00795 Car-Chr2:5793634 Car04g00360 Car-Chr4:2034936 1.28E-18 transposed
Car16g00235 Car-Chr16:1495880 Car04g00360 Car-Chr4:2034936 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00360 K10601 - csv:101215351 902.894