Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00378 ATGCCAACCAGTGCCTCTCAATCGCCGGATAATCAGCTGTCGCCGCCGAACCCACCTCCCAAACAAGGCGCTAAGCCAATCCCATTTCTGATTTCGGTTGCTATTGGCATCATTGTTCGTTTCGCCGTCCCAAAACCGGCGGGGGTTTCAACAAAAGCGTGGCAGTTGCTCGCCATTTTCTTGTCGACGATTACTGGCCTTGTTTTGAATCCCTTGCCGGTGGGTGCTTGGGCGATTCTTGGCTTAACTGTGACTGTTGTTACTAAAACTTTGACGTTTTCTGCTGCTTTTAATGCCTTTACTAGTGAGGTTATTTGGTTGATTGTGATTTCCTTCTTTTTCGCTCGTGGGTTTGTCAAAACTGGATTGGGGGATCGAATCGCGACATATTTTGTTAAATGGATGGGCAAGAGCACGCTTGGTTTGTCTTATGGGTTAACGATTAGTGAGGCTTTGATAGCTCCTGCTATGCCGAGCACCACCGCCAGGGCTGGTGGTGTGTTCTTGCCCATCATTAAATCCTTGTCGCTCGCTGCTGATAGCAAGCCGAACGACCCTTCTTCTAAAAAGATTGGCGCGTATCTCGTTCAGTCTCAGTTTCAGGTTTGTTGCTCTGTTCTTGACTCTGTTCTTGAATCTGTTATTGAATCTGTTCTTGAATCTGTTCTTGAATCTGTTATTACTTGGTTGTGGCAGAGTGCTGGTAACTCTAGTGCCCTGTTCTTAACGGCTGCTGCTCAAAATTTGTTGTGTATTAAACTGGCTGAGCAGCTCGGTGTGCAAATATCTAGCCCTTGGCTTACATGGGCTAAGTTTGCTTGTGTCCCTGCCATCATTGGTCTATTGGCAACGCCTGCAATCTTATATAAGCTGTTTCCTCCAGAGACCAAAAACACGCCAGAAGCTCCAGCCATGGCTGCTAGAAAATTGGAGGCTATGGGTCCTGTCACCAAGAATGAATGGTTCATGGTTGGTACTATGCTTGTTGCTGTGTCTTTATGGATTGCTGGTGAGAAACTTAAAATGGCTAGTGTTGTGGCTGCTATGATTGGTTTGTCTGTGCTTCTTAGTCTTGGTGTTCTTGATTGGGATGATTGTTTGTCTGAGAAGTCGGCTTGGGATACTTTGGCTTGGTTTGGTGTTCTTGTGGGCATGGCGGGACAGTTGACGACGCTCGGTCTTGTCGGTTGGATGTCGAATTCTGTGGCTGATTTGCTTAAGTCTATGTCGCTCAGCTGGCCTGCTGCGTTTGCTATTCTTCAGGTGTTGTATTTCTTTGTTCATTACTTGTTTGCTAGCCAGACTGGTCATGTTGCTGCTTTGTACTCGGCGTTCCTTGCTATGCACTTGGCTGCTAAGGTGCCTGGTGTGTTGGCTGCTTTGGCGTTGGCTTATAACACCAATCTCTTTGGTGCATTGACTCATTATAGCAGTGGCCAAGCTGCTGTTTACTATGGAGGGGGTTTCGTTGAGCTAAGAGATGTATTCAAAGTCGGTTTAGCCATGGCGCTCATAAACGGTACAATCTGGACTGTATTTGGTTGCATTTGGTGGAAGATTCTGGGTCTGTACTGA 1575 46.79 MPTSASQSPDNQLSPPNPPPKQGAKPIPFLISVAIGIIVRFAVPKPAGVSTKAWQLLAIFLSTITGLVLNPLPVGAWAILGLTVTVVTKTLTFSAAFNAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTISEALIAPAMPSTTARAGGVFLPIIKSLSLAADSKPNDPSSKKIGAYLVQSQFQVCCSVLDSVLESVIESVLESVLESVITWLWQSAGNSSALFLTAAAQNLLCIKLAEQLGVQISSPWLTWAKFACVPAIIGLLATPAILYKLFPPETKNTPEAPAMAARKLEAMGPVTKNEWFMVGTMLVAVSLWIAGEKLKMASVVAAMIGLSVLLSLGVLDWDDCLSEKSAWDTLAWFGVLVGMAGQLTTLGLVGWMSNSVADLLKSMSLSWPAAFAILQVLYFFVHYLFASQTGHVAALYSAFLAMHLAAKVPGVLAALALAYNTNLFGALTHYSSGQAAVYYGGGFVELRDVFKVGLAMALINGTIWTVFGCIWWKILGLY 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2149177 2151607 + Carg08078-RA Car04g00378 145803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00378 524 MobiDBLite consensus disorder prediction 1 22 - -
Car04g00378 524 Pfam Sodium:sulfate symporter transmembrane region 29 523 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00378 Car-Chr4:2149177 Car16g00212 Car-Chr16:1202372 0 dispersed
Car04g00378 Car-Chr4:2149177 Car02g01038 Car-Chr2:7243937 1.47E-148 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00378 - K03319 cmax:111485827 897.501