Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00389 ATGGCCACCGGTGTGCTGCTCCGTTCTCTTCGACGTCGCGATTTAGCCTCATCCTCCATTTCAGCTTACCGATCCTTAACAAGCAATGCCAAGTCGTCATTGGCCAGGTCTCACCTCAGCCAATCATGGGCAAGTTTGTCCAGGCCATTCAGTTCAAAGCCAGCTGGGAGTGATGTTATCGGTATTGATTTGGGTACCACCAATTCTTGTGTTTCTGTAATGGAAGGGAAGAATCCAAAAGTTATTGAAAACTCTGAAGGTGCTAGGACCACACCATCAGTGGTTGCTTTCAATCAGAAAGGTGAACTACTTGTAGGAACACCAGCAAAGAGACAGGCAGTTACTAATCCAACTAATACTGTGTTTGGAACCAAACGTCTCATTGGTAGACGCTTTGATGACCCCCAGACACAGAAGGAAATGAAGATGGTACCATACAAAATAGTCAGAGCTCCTAATGGAGATGCTTGGGTTGAAGCAAATGGACAGCAGTACTCACCGAGTCAGATTGGTGCTTTTGTTCTAACAAAGATGAAGGAAACTGCTGAAGCCTATCTCGGAAAGAGCGTGTCCAAGGCTGTAATTACCGTTCCAGCTTATTTCAACGATGCACAGAGACAGGCAACAAAGGATGCTGGCAGGATTGCTGGTTTGGATGTTCAAAGAATTATCAATGAGCCCACTGCTGCTGCACTTTCCTATGGAATGAATAATAAGGAAGGTCTTATTGCTGTCTTTGATCTTGGTGGTGGCACATTCGATGTTTCCATCTTGGAGATATCCAATGGTGTTTTTGAGGTGAAATCGACAAATGGTGACACATTCTTGGGAGGAGAGGATTTTGACAATGCTCTACTGGACTTCCTGGTTAGTGAGTTCAAGCGAACTGATGGAATTGACCTTACCAAGGACAAGCTTGCCTTGCAGAGGCTTAGGGAGGCTGCAGAGAAGGCAAAGATTGAACTATCATCTACATCGCAGACTGAAATTAACCTGCCATTTATCACTGCTGATGCATCTGGTGCAAAGCATTTGAACATCACTTTGACCAGGTCGAAATTTGAAAGTCTAGTTAGTAACCTGATTGAAAGGACCAAGGCACCATGCAAAAATTGTTTGAAGGATGCCAATATTTCCATCAAAGAAGTGGATGAAGTGCTTTTAGTGGGTGGAATGACTCGTGTACCTAAGGTGCAAGAAGTTGTCACAGAAATTTTTGGTAAGAGCCCCAGTAAAGGGGTGAATCCTGATGAAGCAGTTGCTATGGGAGCTGCAATTCAAGGTGGCATTCTTCGTGGTGATGTCAAAGAATTGCTTCTTTTGGATGTTACCCCACTATCGCTTGGTATTGAGACGCTTGGCGGTATATTTACAAGGTTGATCAGTCGGAACACTACCATTCCAACTAAGAAGAGCCAGGTGTTCTCAACTGCAGCTGACAACCAGACCCAGGTGGGTATCAAGGTATTACAAGGTGAGAGAGAAATGGCTTCTGACAACAAGCTTCTAGGGGAGTTTGAGTTGGTTGGAATTCCTCCCGCTCCAAGAGGAATGCCTCAAGTTGAGGTGACATTCGATATTGATGCCAATGGTATTGTTACTGTCTCGGCCAAGGACAAGTCCACCGGTAAAGAGCAACAAATCACCATTCGATCTTCTGGAGGACTCTCAGATGACGAAATAGAGAAAATGGTGAAGGAAGCGGAGTTGCATGCCCAGAAGGATCAAGAGAGGAAATCTCTTATTGACATCAGAAACAGTGCAGATACCACCATCTACAGCATTGAGAAGAGCTTGGGTGAATACAGGGAGAAAATACCTAGTGAGGTTGCCAAGGAAATCGAGGATGCAGTAGCAGATTTGAGGAAGGCAATGTCTGGAGATGACATCGAAGAGATCAAGGCAAAACTTGACGTCGCCAACAAAGCTGTTTCCAAGATTGGGCAACATATGGCTGGTGGTTCAGGTGGTGATGCTGCTTCTGGAGGGTCTCAGGGTGGCGAACAAGCTTCTGAAGCTGAGTACGAAGAGGTGAAGAAATAA 2043 45.23 MATGVLLRSLRRRDLASSSISAYRSLTSNAKSSLARSHLSQSWASLSRPFSSKPAGSDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFGTKRLIGRRFDDPQTQKEMKMVPYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKSTNGDTFLGGEDFDNALLDFLVSEFKRTDGIDLTKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFESLVSNLIERTKAPCKNCLKDANISIKEVDEVLLVGGMTRVPKVQEVVTEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLISRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKLLGEFELVGIPPAPRGMPQVEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSDDEIEKMVKEAELHAQKDQERKSLIDIRNSADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMSGDDIEEIKAKLDVANKAVSKIGQHMAGGSGGDAASGGSQGGEQASEAEYEEVKK 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2207151 2210933 + Carg08089-RA Car04g00389 145814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00389 680 ProSitePatterns Heat shock hsp70 proteins family signature 1. 62 69 IPR018181 -
Car04g00389 680 Pfam Hsp70 protein 59 651 IPR013126 GO:0005524|GO:0140662
Car04g00389 680 MobiDBLite consensus disorder prediction 649 680 - -
Car04g00389 680 ProSitePatterns Heat shock hsp70 proteins family signature 3. 386 400 IPR018181 -
Car04g00389 680 Coils Coil 301 328 - -
Car04g00389 680 ProSitePatterns Heat shock hsp70 proteins family signature 2. 245 258 IPR018181 -
Car04g00389 680 Hamap Chaperone protein DnaK [dnaK]. 56 678 IPR012725 GO:0005524|GO:0006457|GO:0051082
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00667 Car-Chr2:4983473 Car04g00389 Car-Chr4:2207151 0 dispersed
Car04g00389 Car-Chr4:2207151 Car04g01975 Car-Chr4:14210970 0 dispersed
Car16g00255 Car-Chr16:1619869 Car04g00389 Car-Chr4:2207151 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00389 K04043 - csv:101216102 1219.53