Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00441 ATGGGAAGCATTGAAGAACAGAGGACTGTAACAGGGCTCGCCGCCAAAGACCCATCCGGGATTCTGTCTCCCTACACTTATACTCTCAGAAACACCGGCCCTGAAGATGTTTTCATTAAAGTGATTTGCTGTGGAGTATGCCACTCTGATCTTCACCAAATCAAAAATGACCTCGGCATGTCCAATTATCCGATGGTTCCTGGACATGAGGTCGTCGGAGAAGTGGTGGAGGTTGGGTCGGATGTTGGTCGGTTTAGAACAGGGGAGTTGGTCGGAGTTGGGTGCATTGTTGGATCTTGTTCGAGTTGTAATCCTTGCAATTCCGATAAGGAGCAGTATTGTAACAGGAGAATCTGGAGTTATAATGATGTGTATCATGATGGCCGTCCCACCCAAGGCGGGTTCTCCTCCGCCATGGTCGTTCACCAAAAATTTGTGGTGAAAATCCCTGAAGGGATGTCGCCGGAGCAGGCGGCGCCGCTGTTGTGCGCCGGAGTGACAGTGTACAGCCCGCTAAGTCACTTTGGGCTGAAACAGAGTGGACTCAGAGGCGGAATATTGGGGTTAGGCGGCGTGGGGCATATGGGTGTGAAAGTGGCGAAGGCTCTGGGTCACCACGTGACGGTGATAAGCTCGTCGGAGAAGAAGAGGGTGGAGGCTCTGGAAGATCTCGGCGCCGATGAGTACTTGGTCAGCTCCGACAGTACTCAAATGGAACGAGCCATTGATTCGCTGGATTACATCATTGACACAGTCCCTGTTTTTCATCCTCTCGAGCCGTATCTGTCACTTCTGAAACTCGACGGCAAATTGATCTTGATGGGCGTTATTAATAAGCCATTGCAATTCGTTTCCCCTGTTCTTATGCTCGGGAGGAAGACGATTACGGGGAGCTTCATCGGAAGCATGACGGAGACGCAAGAAGTGTTGGATTTCTTCAAAGAGAAGGAGCTGACCTCCATAATTGAAGTGATAAAGCTTGATTACATTAACCAGGCTTTGGAGAGGTTGGAGAAGAATGACGTCAGATACAGGTTCGTCGTAGATGTCGCCGGAAGCAAGTTGCCTCAGTGA 1074 50.19 MGSIEEQRTVTGLAAKDPSGILSPYTYTLRNTGPEDVFIKVICCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVGRFRTGELVGVGCIVGSCSSCNPCNSDKEQYCNRRIWSYNDVYHDGRPTQGGFSSAMVVHQKFVVKIPEGMSPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSEKKRVEALEDLGADEYLVSSDSTQMERAIDSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINKPLQFVSPVLMLGRKTITGSFIGSMTETQEVLDFFKEKELTSIIEVIKLDYINQALERLEKNDVRYRFVVDVAGSKLPQ 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2500572 2502244 + Carg08141-RA Car04g00441 145866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00441 357 PANTHER ALDEHYDE REDUCTASE 6 357 - -
Car04g00441 357 CDD CAD1 11 349 - -
Car04g00441 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 318 IPR036291 -
Car04g00441 357 Pfam Alcohol dehydrogenase GroES-like domain 35 149 IPR013154 -
Car04g00441 357 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 6 357 - -
Car04g00441 357 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Car04g00441 357 Gene3D - 164 320 - -
Car04g00441 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Car04g00441 357 Gene3D - 14 350 - -
Car04g00441 357 SUPERFAMILY GroES-like 17 181 IPR011032 -
Car04g00441 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00441 Car-Chr4:2500572 Car20g00941 Car-Chr20:10326946 3.59E-87 dispersed
Car11g01119 Car-Chr11:8903347 Car04g00441 Car-Chr4:2500572 5.88E-09 wgd
Car16g00304 Car-Chr16:1873847 Car04g00441 Car-Chr4:2500572 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00441 K00083 - csv:101222395 618.231