Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00445 TCTCTCTCTCTCTCTCTCTCCATATTTGGTAAACCCAAGGACTTCCTCTTTCTCCATCTTCTTCTTCTTCCTCTAAAAGATGCAGCATCTGTTGAAGCCATGAACTCCATTGCCAGAAATCTTGCTCTGTTTTGGAGCTTCGCTTTCTTCTTTCACTTTCTTCTTCATTCTCCTGCTCTGGCTCTCAACGGCGATGCCACCCTCTTGATTTCTCTCAAGCGCTCCATTCTCGGAGATCCTTTGAATGTTTTGGCTAATTGGAATTTCAATGATGATACCCCCTGTTCTTGGCGTGGGGTCACCTGTACTGACCTTCAAACCGACGGTGGTGGCTGGACGGATTTCCTCAGAGTCACTGCCCTGTCCCTCCCCGGCAGTCAGCTTCTGGGTTCCATTCCGGATGAGCTGGGAAGGATTGAACATCTTCGTCTTCTCGATCTTTCTGGTAATTTCTTTAATGGGTCTTTGCCGGTTTCCATTTTCAATGCTTCGGAGCTTCAGATTCTTTCTCTGTCGAATAATGTCATCTCCGGGGAGTTGCCGGTGGCTATTGGGGGTTTGAGGAGTCTTCAGGTTTTGAATCTGTCTGATAATGCGTTGGCCGGGAAAGTGCCCAGAAATCTCACTGCTCTGAGGAATCTCACTGTGGTTTCTTTGAGGAGTAATTACTTCACCGGAGAGATTCCGGGGAATTTCAGTTCGACGGAGGTTTTGGATCTGTCGTCTAATTTGCTTAATGGGTCTCTGCCGGCGGATTTTGGTGGGGAGAAACTGCGGTATTTGAACTTCTCTTACAATAAACTTTCAAGTTCGATTCCGGTGGAGTTCGCCAAGAAGATTCCGGCGAATGCGACAATGGATCTCTCTTTCAACAATCTCACCGGAGTAATTCCTCAGTCGACTGCTCTGCTCAACCAGAAAACAGAGGCGTTCGCCGGAAATGAAGATCTCTGCGGGAAGCCATTGAAGCATCTCTGTTCGATTCCTTCTTCACTCACAACTCCCCCAAATGTTTCTGATTCTTCATCTTCTTCTCCAGCTATCGCCGCCATACCCAAAACAATCGGCGCCATTCCGGCAACACAGTCCCTCGGAGGTCCAGGGACACAAACTCCTCCGCCCCGTAACACCATGAAACCCATCACAATAGCCGCAATCGCCGTTGGAGACCTCGCCGGAGTCGCCATTCTCGCCGTCGTGATTCTCTACGTCTACCATCACCAGAAACAAAAAAACCCCAATTCCAAAACCCCTAAATCCACCGTGAAGAAGCCGCCGATTGGGTCACAACAAACCCTCCAAAGTAATCAGAGAAAACCCTCGTCGGTGTTGTTCTGTTTACCCACCAAAGGCGAAGAGACATCAGAGGCAACGAGTTCCTCCGACGGCGAAGAACAAAGAGACAAACCAAGCACAACCCACGACGGAGAGAACAGAGAGAGTAAGAAAAACGGTGTTCTCGTTACAGTAGACGTAGAAACAGAGCTCGAATTGGAGACTCTGTTAAAGGCATCAGCGTATATACTCGGAGCAAGCGGCGAAAGCATTGTGTACAAGGCAGTGCTTGAAGACGGCACGGCGTTTGCCGTTCGAAGGATCGGCGACAGCGGCATTGAAAGCTTCAAGGATTTCGAGAACCAAGTGAGAGCCATTGCAAAGCTTCGACATCAAAATTTAGTAAAAATCCGAGGATTCTTCTGGGGAGAAGACGAGAAGCTCATCATCTACGACTATGTCTCCAATGGCTGCCTTGCATCCTCCATCCACAGAAAACCGAGTTCATCGTCTTCTTCCCAGAGCCATTTATCATTCGAAATCCGACTAAAAATCGCAAGAGGAATCGCTCGAGGACTGACCTTCATCCACGACAAGAAGCACGTCCATGGCAATCTCAAGCCGTCCAACATCCTCCTCAACGCCGATATGGATCCGTTAATCACCGATCTCGGCCTCGACAAGCTCCTAATCAGCGGCTCCAAAATCGCCCTTACCTCCGCCTCCACCCGAAACTTCGGCAGCCACAGATCCACACCGAATCGCGAGCACCAAGAGAGCAACGTCGGTAGCGCAATTAGCGGCGGAAGCCCGAGCGTAAGCTTGGGATCGGCATACCAGGCGCCGGAATCGCTGAGGAATCTGAAACCCAGCCCTAAATGGGACGTGTACTCGTTCGGAGTGATCTTGCTGGAGATTCTGAGCGGGAGAATCGTAACGGAGAGGGAGGCGAATCAATGGAACATCGGTGATGATGAAGTACGGATGAAGAAGATGATCGATCTGGTGATCAGAGAGGAAGTGGAAGGGAAAGAGGAAGCAATGATCAGGATTTTTAGATTAGGGTTTAGGTGTGCTTGTTTCGTGCCTCAGAAGAGACCAACCATGAAAGAAGCTCTGCAACAACTTGATAGAATTTCTTCCTCCATTTCTTCTTCACGCTAA 2439 49.32 SLSLSLSIFGKPKDFLFLHLLLLPLKDAASVEAMNSIARNLALFWSFAFFFHFLLHSPALALNGDATLLISLKRSILGDPLNVLANWNFNDDTPCSWRGVTCTDLQTDGGGWTDFLRVTALSLPGSQLLGSIPDELGRIEHLRLLDLSGNFFNGSLPVSIFNASELQILSLSNNVISGELPVAIGGLRSLQVLNLSDNALAGKVPRNLTALRNLTVVSLRSNYFTGEIPGNFSSTEVLDLSSNLLNGSLPADFGGEKLRYLNFSYNKLSSSIPVEFAKKIPANATMDLSFNNLTGVIPQSTALLNQKTEAFAGNEDLCGKPLKHLCSIPSSLTTPPNVSDSSSSSPAIAAIPKTIGAIPATQSLGGPGTQTPPPRNTMKPITIAAIAVGDLAGVAILAVVILYVYHHQKQKNPNSKTPKSTVKKPPIGSQQTLQSNQRKPSSVLFCLPTKGEETSEATSSSDGEEQRDKPSTTHDGENRESKKNGVLVTVDVETELELETLLKASAYILGASGESIVYKAVLEDGTAFAVRRIGDSGIESFKDFENQVRAIAKLRHQNLVKIRGFFWGEDEKLIIYDYVSNGCLASSIHRKPSSSSSSQSHLSFEIRLKIARGIARGLTFIHDKKHVHGNLKPSNILLNADMDPLITDLGLDKLLISGSKIALTSASTRNFGSHRSTPNREHQESNVGSAISGGSPSVSLGSAYQAPESLRNLKPSPKWDVYSFGVILLEILSGRIVTEREANQWNIGDDEVRMKKMIDLVIREEVEGKEEAMIRIFRLGFRCACFVPQKRPTMKEALQQLDRISSSISSSR 812
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2515623 2518318 + Carg08145-RA Car04g00445 145870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00445 812 MobiDBLite consensus disorder prediction 409 443 - -
Car04g00445 812 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Car04g00445 812 MobiDBLite consensus disorder prediction 668 695 - -
Car04g00445 812 Pfam Protein kinase domain 509 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00445 812 MobiDBLite consensus disorder prediction 409 484 - -
Car04g00445 812 Pfam Leucine rich repeat N-terminal domain 63 102 IPR013210 -
Car04g00445 812 MobiDBLite consensus disorder prediction 460 484 - -
Car04g00445 812 ProSiteProfiles Protein kinase domain profile. 503 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00340 Car-Chr2:2407856 Car04g00445 Car-Chr4:2515623 0 dispersed
Car04g00445 Car-Chr4:2515623 Car20g00831 Car-Chr20:5532013 0 dispersed
Car16g00308 Car-Chr16:1886318 Car04g00445 Car-Chr4:2515623 1.40E-79 transposed
Car16g00307 Car-Chr16:1884400 Car04g00445 Car-Chr4:2515623 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88769 PF00069 Pkinase 7.60E-32 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00445 - - cmax:111478916 1366.29