Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00447 ATGGCATTGCATCGCTATGAGCCAGCCGACGATGGAGCCCAAACCCATTTGATTTCGCTCGATTCTCTGTTTTGCGAGGAGGAGAAATGGGAGGAGGAGGATGAGGAGGAGGAGGATGAAGATGAGCTAGAACAGACCCATCAAGCCCATGTTTTTTCTTTGGATGTTTTGGAGGAAGATCTATTTGGGGAAGATGAACGCCTTCTCTCCTTGTTGTCTAAGGAAACAGAGCAGCTGAAACAGAGCAATCTCAAGCTTGAACCTCTGTTAATGGATCCTTCTGTCTCTGCTGCTCGTTCTTCGTCTGTGGAGTGGATGCTTAAAGTTAAATCCCATTATGGGTTTTCGTCTCTCACTGCAATTTTGGCCGTTGCTTATTTCGACAGGTTCCTCTCGAGCTTTCATTTTAGAAGTGACAAGCCATGGATGAACCAGCTTGTGGCTGTCACTTGCCTCTCGTTGGCGGCTAAAGTGGAGGAGGTTGAAGTTCCTCTGCCACTTGACCTTCAAGTGGAGGATGCGAAATTTGTGTTTGAGGCCAAAACCATTCAGAGAATGGAGCTTTTAGTGCTCTCAACTCTTCGATGGAGGATGCATTTGGTTACTTCATATTCATATCTTGACAACATTGTAAGAAGGCTTGGGTTAAAGACCAATCTTCATTTGGAGTTCTTCAAGCGTTCTGAGAATCTCCTCCTTTCTCTTCTCTCAGATTCAAGATTTGTGGGTTATCTTCCATCTGTCTTAGCAACTGCAACAATGATGAACATTATAGAACAGATTGAACCCCATAAGTCAATGGAGCACCAAGATCATCTTCTGGGTGTTCTTAAAATGAGCAAGGACAAAGTGCAAGGCTGTTACAATCTTGTAGTGGAGCATTCAAAGGCATGTAGCAATGGCTTATATCATTCCATCAATCCCCACAAGCGGAAGTACGAACATCATCAAGCTCCTGATAGCCCAAATGGTGTGATTGATGGTGGTTTCAGTTCAGACAGCTCCAATGATTCATGGGCATTGAGAGCAGCAGCATCAGTTTGTTCTTCACCTGAACCATCTTTCAAGAAGAACAAAACCGAAGAGCCAAGAATGTTATATCATTCTCTGAACAGGAGGGTCTGTTTGGACATTGTTGGCAGCCCTTCTTAG 1152 44.36 MALHRYEPADDGAQTHLISLDSLFCEEEKWEEEDEEEEDEDELEQTHQAHVFSLDVLEEDLFGEDERLLSLLSKETEQLKQSNLKLEPLLMDPSVSAARSSSVEWMLKVKSHYGFSSLTAILAVAYFDRFLSSFHFRSDKPWMNQLVAVTCLSLAAKVEEVEVPLPLDLQVEDAKFVFEAKTIQRMELLVLSTLRWRMHLVTSYSYLDNIVRRLGLKTNLHLEFFKRSENLLLSLLSDSRFVGYLPSVLATATMMNIIEQIEPHKSMEHQDHLLGVLKMSKDKVQGCYNLVVEHSKACSNGLYHSINPHKRKYEHHQAPDSPNGVIDGGFSSDSSNDSWALRAAASVCSSPEPSFKKNKTEEPRMLYHSLNRRVCLDIVGSPS 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2527708 2529647 - Carg08147-RA Car04g00447 145872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00447 383 Pfam Cyclin, N-terminal domain 96 198 IPR006671 -
Car04g00447 383 Coils Coil 20 40 - -
Car04g00447 383 Pfam Cyclin, C-terminal domain 201 317 IPR004367 -
Car04g00447 383 ProSitePatterns Cyclins signature. 99 130 IPR006671 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00447 Car-Chr4:2527708 Car12g00565 Car-Chr12:3777855 2.18E-90 dispersed
Car01g01415 Car-Chr1:12255474 Car04g00447 Car-Chr4:2527708 1.18E-73 wgd
Car11g01112 Car-Chr11:8836464 Car04g00447 Car-Chr4:2527708 2.35E-82 wgd
Car16g00312 Car-Chr16:1905764 Car04g00447 Car-Chr4:2527708 0 wgd
Car04g00447 Car-Chr4:2527708 Car05g00140 Car-Chr5:702502 2.61E-97 wgd
Car04g00447 Car-Chr4:2527708 Car09g00219 Car-Chr9:1082662 1.56E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00447 K14505 - csv:101221213 576.244