Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00456 ATGGCGGCGATCGCATTGTCTGTTGCTCAGCTTGCTAATGTGACTGGTGAACTAGGAGTTTCTTCGAACTTGTCTAACATTTGCCTGCAATCATTGTTTGAAACCATGGAACTGTATGGAGTTCCTAGAAATGCCACTGGTTTCTGTGGGGTTGGGACAAAGATTACAGTGAATTACGCGTGTAGAGGTCGAGAAACTGTCGAACAAATGCTGGAATCTCCAAGTTTCTCAAATGTTAGTGACAATTGTGAATTGCCTCTCTTGGAGGAAAGTGTTTGCAGGAAGTGTATCAATGCTGGGATTTTGTATCTACGTAATCTGATTGGAAGAGAAGACAATATAACGTTAAATACTTGTCGCGACGCGACGTTTGTTGCACTTGCTAGCCATCTTGATACTGCTTCAGTCGTTGATCTTGCAACATGCTTCTTTGGAGTTCAAGGTCTTGACAAGCCTCCAGCTCCATCCCCTTCTTTTGCTACCCCAGATATTGCCCCAAGTCCATCAGCTGCTGCAAGTCCGGGGCCAACGATACCAGGACCTTCTACGTTTAAAAAGTTCAGCTATAAAGAGATCAAGAAGGCAACAGATAGTTTTAGTACAACAATTGGACAAGGAGGATATGGAACCGTTTATAAAGCTCAATTCAGTGATGACTTAGTAGTAGCTGTGAAGAGGATGAACAAAGTCTCCGAGCAGGGGGAGGATGAATTTGGCCGAGAAATCGAGCTGCTCGCAAGATTACATCACAGACACCTTGTTGCTTTAAGAGGCTTTTGTGTTGATAAGCATGAACGGTTTCTTGTGTACGAATATATGACTAATGGAAGCTTGAAGGATCATCTTCATGGTCCTGGCAGGACGCCTCTAAGTTGGCAGACGAGAATACAAATTGCCATCGATGTCGCCAATGCTCTGGAGTACCTTCATTATTATTGTGATCCCCCACTATGCCATAGAGACATTAAGTCCAGCAACATTTTGCTGGATGAGAACTTTGTAGCTAAGATTGCAGATTTCGGCCTTGCGCATGCTTCAGAGGGCGGTTCTATTTTCTTTGAACCCGTAAACACCGACATCTGTGGAACGCCAGGTTATATGGATCCCGAGTATGTTATCACGCAAGAGCTTACCGAGAAAAGTGATATATACAGCTATGGCGTGCTGCTCCTGGAAATAGTTACGGGGAGACGTGCTATACAAGATGGTAAGAATTTAGTAGAATGGTCTCAGGTGTACATGGTTCCAGATTCAAGGATATCGGAACTAGTAGATCCAAGGATTAAGAGTTGTTTCGACTTAGAACAACTCCACACAGTCGTGTCGATTGTGAGATGGTGCACCGAGGGAGAAGGCAGGGTAAGGCCGTCAATTAAACAGGTGCTTCGAGTATTGTACGAGAGTTCGGACCCGGTGCATCAAGAGCTGGTGGAAGCTGTTGATGAAGAAGAAGAATATGGAGGGAGTGAAGGAAGGCAGAGCATGAGCAGGAGAAAAGGGCATAGAAGTGATGTGATTTTTCACAGTGGAGAAGGAAGGTATCTTGCATCTTCATCAAGCACAACAAAGTCATATTGTAGTAGAAGCTTTTTGCTTGAAACCGGTTCACCACAATCTCCTCCCAATATTTTCTCTGTCACAGATCAATTGTTTTAG 1656 44.2 MAAIALSVAQLANVTGELGVSSNLSNICLQSLFETMELYGVPRNATGFCGVGTKITVNYACRGRETVEQMLESPSFSNVSDNCELPLLEESVCRKCINAGILYLRNLIGREDNITLNTCRDATFVALASHLDTASVVDLATCFFGVQGLDKPPAPSPSFATPDIAPSPSAAASPGPTIPGPSTFKKFSYKEIKKATDSFSTTIGQGGYGTVYKAQFSDDLVVAVKRMNKVSEQGEDEFGREIELLARLHHRHLVALRGFCVDKHERFLVYEYMTNGSLKDHLHGPGRTPLSWQTRIQIAIDVANALEYLHYYCDPPLCHRDIKSSNILLDENFVAKIADFGLAHASEGGSIFFEPVNTDICGTPGYMDPEYVITQELTEKSDIYSYGVLLLEIVTGRRAIQDGKNLVEWSQVYMVPDSRISELVDPRIKSCFDLEQLHTVVSIVRWCTEGEGRVRPSIKQVLRVLYESSDPVHQELVEAVDEEEEYGGSEGRQSMSRRKGHRSDVIFHSGEGRYLASSSSTTKSYCSRSFLLETGSPQSPPNIFSVTDQLF 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2587998 2592121 + Carg08156-RA Car04g00456 145881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00456 551 Pfam Protein kinase domain 201 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00456 551 MobiDBLite consensus disorder prediction 486 501 - -
Car04g00456 551 ProSitePatterns Protein kinases ATP-binding region signature. 203 225 IPR017441 GO:0005524
Car04g00456 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Car04g00456 551 MobiDBLite consensus disorder prediction 154 179 - -
Car04g00456 551 MobiDBLite consensus disorder prediction 479 501 - -
Car04g00456 551 ProSiteProfiles Protein kinase domain profile. 197 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00716 Car-Chr2:5323192 Car04g00456 Car-Chr4:2587998 4.50E-52 dispersed
Car02g01089 Car-Chr2:7562175 Car04g00456 Car-Chr4:2587998 4.57E-58 dispersed
Car04g00456 Car-Chr4:2587998 Car09g00834 Car-Chr9:5090037 5.59E-80 dispersed
Car15g01215 Car-Chr15:9487865 Car04g00456 Car-Chr4:2587998 4.13E-57 dispersed
Car20g00122 Car-Chr20:686588 Car04g00456 Car-Chr4:2587998 6.27E-59 dispersed
Car16g00317 Car-Chr16:1950537 Car04g00456 Car-Chr4:2587998 2.37E-87 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88770 PF00069 Pkinase 7.50E-51 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00456 - - csv:101219079 654.44