Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00499 ATGGACGTGGAGTCCTCCCGTTCGCCTCGGGCAGTTGAGAAAGATGGCGGTAACAAGGAGGAAGAGAAGCATGGGAGTGACGAGAAGGACGACACCGACACCGACACCGACATGCCGTCGTCGTTGAACCTTAGAGAGCTTTCTAAGGTTATACTTCCACCTTTGGGAGTGTCGAGCTTCACTGATGGAAGTAAATTTAAGGGTAATAAATGGATCGTCTCTCCCATGAGCTCGAGATACAGGTGGTGGCAGTCGTTCATGGTGGTTTTGGTTGCTTACTCGGTGTGGGTTTATCCATTGGAAGTGGCGTTCAAGGACGCAATTCCGAAGCGGGAATTATTAATTGCAGACAATGTTGTCGATCTCTTCTTCGCCTTCGACATCTTCCTCACCTTCTTCGTTGCTTACATTGATCATCGGACTCAGCTTCTTGTTCGTGATTCTAAGAAGATAGCTATCAGGTACTTGTCAACATGGTTCTTGATGGATTTGGCATCAACAATCCCATTTGAGACAATTGGATACCTTTTTGTTAGCAACTATAATGGTGGTCTCCCTTATGCCCTCCTGGGATTGCTCAAGTTTTGGCGACTACGACGTGTCAAGCAATTTTTCACAAGGCTAGAGAAGGACATTAGATTCAGCTACTTTTTGGTTCGATGTGCTAGGCTTCTATCTGTTACTTTGTTTTACGTCCATTGTGCCGGATGCCTTTACTACTTGTTGGCCGACAGATATCCAAATGAAGGACAGACCTGGATAGGAACCATGAATCCAAATTTTAAAGAGATTAGCTTTGGAGTGAGATATATTTCAGCCTTGTATTGGTCTATCACCACCATGACGACTGTTGGTTATGGTGATCTTCATGCTGTGAACATTGTAGAGATGATCTTCATCATTTTCTACATGCTCTTCAATCTCGGCTTAACCGCTTACTTGATCGGTAACATGACGAACTTAGTCGTCGAAGGAACTCGTCGCACGATGGAATTTAGAAACAACATCGAAATGGCGTCAAACTTTGTTAACCGAAACCGGCTGCCTTCAAGATTGAAGGAACAGATATTGGCATATATGTGTTTGAGATTCAAGGCAGAGAGCCTAAACCAACAACAGCTGATTGATCAGCTTCCAAAGTCGATATGTAAAAACATCTGTCAGCAATTGTTTTTGCCAACAGTGGAGAAAGTCTACCTCTTCAAGGGTGTCTCAAAGGAAACACTTGCATTGCTGGTAGCAAAGATGAAAGCTGAGTATATACCTCCGAAGGAGGACGTGATTATACATAACGAAACCCCTGATGAAGTTTATATCATCGTGTCCGGGGAAATTGAAATTATCGACTGTGAGATGGAGCGGGAGCGGATTGTTGGGACACTACAGTGTGGCAGTATGTTTGGGGAAGTTGGAGCACTTTGTTGCAAAAACCAAAATCTTACATACAGAACCAAAACTCTTTCACAGCTCTTGAGGCTTAAAACAAGTATACTACAAGAAGCTATGCATGTCAGGCAAGACGACAGTATGGTCATTGTCAAGAACTTCCATCAGGAAAGGCAGGCCAGCCACAGAATCACCATAGAAGGTTCAGTTGAAAAAGAAACGCCAGCGTTCAATGAAGAAAAGGATCAAAGTTTCAATTGGAAACACTCCATTGAATTAGACTTTGCTAGAGTAAATGTATACAAAGGCCATCCAGTAGCCAGAAAACAGGCTTCTTGTGAAGATCCTGGAAAGCTCATCAAATTGCCACATTCAATGGAGGAGCTCAAAAGAGTTGCAGGTGAAAAGCTTGGATTTGATGCAAGAAATGCTGTTTTGACAAATGAAGAAGGCTCTGAAATTGACTCCATTGATGTGGTAAGGGATAATGATAAGCTTTTCTTTTCATAG 1896 43.04 MDVESSRSPRAVEKDGGNKEEEKHGSDEKDDTDTDTDMPSSLNLRELSKVILPPLGVSSFTDGSKFKGNKWIVSPMSSRYRWWQSFMVVLVAYSVWVYPLEVAFKDAIPKRELLIADNVVDLFFAFDIFLTFFVAYIDHRTQLLVRDSKKIAIRYLSTWFLMDLASTIPFETIGYLFVSNYNGGLPYALLGLLKFWRLRRVKQFFTRLEKDIRFSYFLVRCARLLSVTLFYVHCAGCLYYLLADRYPNEGQTWIGTMNPNFKEISFGVRYISALYWSITTMTTVGYGDLHAVNIVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNNIEMASNFVNRNRLPSRLKEQILAYMCLRFKAESLNQQQLIDQLPKSICKNICQQLFLPTVEKVYLFKGVSKETLALLVAKMKAEYIPPKEDVIIHNETPDEVYIIVSGEIEIIDCEMERERIVGTLQCGSMFGEVGALCCKNQNLTYRTKTLSQLLRLKTSILQEAMHVRQDDSMVIVKNFHQERQASHRITIEGSVEKETPAFNEEKDQSFNWKHSIELDFARVNVYKGHPVARKQASCEDPGKLIKLPHSMEELKRVAGEKLGFDARNAVLTNEEGSEIDSIDVVRDNDKLFFS 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2822223 2827820 + Carg13209-RA Car04g00499 145924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00499 631 MobiDBLite consensus disorder prediction 1 40 - -
Car04g00499 631 Pfam Ion transport protein 80 329 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car04g00499 631 ProSiteProfiles KHA domain profile. 559 631 IPR021789 -
Car04g00499 631 MobiDBLite consensus disorder prediction 1 31 - -
Car04g00499 631 Pfam KHA, dimerisation domain of potassium ion channel 559 630 IPR021789 -
Car04g00499 631 Pfam Cyclic nucleotide-binding domain 424 502 IPR000595 -
Car04g00499 631 ProSiteProfiles cAMP/cGMP binding motif profile. 400 519 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00499 Car-Chr4:2822223 Car13g00439 Car-Chr13:6831686 2.20E-177 dispersed
Car16g00344 Car-Chr16:2125422 Car04g00499 Car-Chr4:2822223 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00499 K21867 - csv:101205212 1062.75