Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00506 ATGGCTTCTCGTTTCTGGTCCCAGGGTGGTGGTAGTGGTAGTGATTCTGAAGCGGAGAAGAGTGACTATGATGAAGAGATTGACGACCTACAAGCTGATCCTAGCTCCCAAGCGAATAGAAGCAGGTATCTGCAAGGGAATGCCAGTGACAGTGATGATTCTGATAAAGATAGACGTACTGTCAGGTCGGCTAAAGATAAGCGTTTTGAGGAGATGTCTGCTTCTGTGGATCAGATGAAAAATGCAATGAAGATCAATGACTGGGTAAGCTTGCAGGAGAGTTTTGATAAAATAAATAAGCAGCTTGAGAAGGTCATGCGTGTTATGGAGTCTGAGAAGGTGCCAACTCTTTATATTAAAGCACTTGTGATGTTGGAGGACTTCCTAAATCAAGCCATGGCTAATAAGGAAGCTAAGAAGAAAATGAGCACTAGCAATGCTAAGGCCTTGAATTCAATGAAACAGAAGCTAAAGAAGAACAATAGGCAATATGAAGAGTTAATTACAAAGTGTAGGGAGAATCCTGAGGTTGAGGAAGAAAAGGATGATGAGATGGAAACGGAGGAGGATGATGATGATGATGACGATTCTGTAATTGAGGAGGACCCTACTAAAATTTTGTCAGGATCAGAAGATGAAGAGGATGACGAAGAAGACCAAGAGGAGCCCGATGGCCCTTGGGTGAAACAGTTGAGCAAACGGGATAAGCTCATGGATAAGCAGTTTATGAAGGATCCGAGAGAGATCACATGGGACACTGTTAACAAGAAATTTAAGGAGGTTGTGGCTGCCCGGGGTAGGAAGGGAACTGGAAGATTTGAGCAGGTTGAGCAGCTTACGTTCTTAACAAGAGTTGCTAAGACCCCTGCACAGAAGCTTGAGATTTTGTTCAGTGTTATATCTGCTCAATTTGATGTTAATCCAGGTCTCAGTGGGCACATGCCTATCAGTGTGTGGAAGAAGTGTGTGCAAAATATGCTTTCTATTATTGACATTCTTATGCAGAATTCTAACATTGTGGTGGATGATATGGTTGAACCTGATGAGAACGAGAGCCAGAAGCCAGCAGACTATGAGGGCACAATTCGTGTTTGGGGAAACTTGGTTGCTTTTGTTGAGAGGATTGACACTGAGTTTTTTAAGAGCTTGCAGTGTATTGATCCACATACACGTGAGTATGTTGAAAGACTCAGAGATGAGCCAATGTTTATGGTTCTTGCTCAGAATGTCCAAGAATATTTGGAACGAACTGGGGATTACAAAGCAGCTTCAAAAGTTGCCTTGAGACGTGTCGAACTGATCTATTACAAACCACAAGAGGTTTATGATGCCATGAGAAAGCTCGCAGAGCTGTCCGAAGATGGAGCTAGTGGAGATGCTAGTGAGGAGGCTAAAGTTGCAGAAGAGATTAGGGGCCCTGCTGCATTTATTGTCACGCCGGAGGTTGTACCTCGTGTTCCCACCTTTCCAGAGAGTAGTAGAGCTTTTATGGACATTCTGGTGACCCTTATATACCAATATGGAGACGAGCGCACTAAAGCACGAGCTATGCTCTGTGATATTTACCACCATGCGCTCTTTGATGAATTTTATATTTCTAGTGACTTGTTACTGATGAGTCACTTACAGGATAGTATTCAACACTTGGACATTTCAACACAGATCCTTTTCAATAGGGCAATGGCTCAACTTGGTCTATGTGGATTTCGGGTTGGCCTGATTAGTGAAGCACATGGCTGCCTTTCAGAATTATATTCAGGTGGGAGGGTGAGGGAATTGCTTGCACAAGGTGTCTCACAAAGCCGATATTATGAAAAGACTCCAGAGCAGGAAAGGCTTGAAAGGAGGAGGCAGATGCCATACCACATGCACATAAATCTTGAGCTCCTGGAGGCTGTGCATTTGATATGTGCTATGCTGCTGGAAGTTCCCAACCTGGCAGGCAGTGTTCATGATGCAAAGCGCAAGGTTATTAGCAAGAACTTTAGAAGGTTACTGGAGGTGAGTGAGAGACAAACGTTCACTGGTCCTCCCGAGAATGTCAGAGATCATGTAATGGCTGCTACCAGAGCCCTTCGCAAGGGCGATTTCCAAAAAGCTTTTGATGTCATTGCATCTCTAGATGTATGGAAGCTACTTAGAAATCGTGATGATGTGCTGGAAATGGTTAAAGTAAAGATCAAGGTGGAAGCTCTGAGGACGTACCTTCTCACGTACTCTTCCTCATATGATTCTCTGAGTTTGGACCAGCTGACTCGAATGTTCGACATCGCAGAGGGTCAAACACACAGTATCGTTAGCAAGATGATGATAAATGAGGAGCTCCATGCAAGTTGGGATCAGCCAAGTGGATGTGTCATCTTCCATGATGTTGCGCTCACCCGGTTACAGGGCTTGGCGTTCCAGTTGGCAGATAAGCTGTCTATCCTTGCTGAAACTAATGAGAGGGCAGTGGAGGCAAGAATAGGAGGAGTAGATTTACCGATGAGGCGAAGAGACAACCAAGAGTATGCTGCCGGAGCTGTAGGTGGTGGTAGCAGGTGGCCAGACAATCAAGGAAGGCAAGGTGGCGGTAGTTCGCGTGCAGGGTATAGCAATGGAGGGCGTGGCGAAGGTGGGGGTGGCGGATATGGTAGAGACCGGACGGGTCAGTCACGAGGAGGCAATGCAGGAGGATATCAAAGCACCCGTTATCAAGACGCTGCATATAGATCGGGGAGGAGTGCTTATCAGTCTGGTTCTGTCCGAGGATCCCAGATGGGTGCTTCAGCTCGCATGGTCAGTCTCAACAAAGGTGTTATTGCTTAA 2808 45.55 MASRFWSQGGGSGSDSEAEKSDYDEEIDDLQADPSSQANRSRYLQGNASDSDDSDKDRRTVRSAKDKRFEEMSASVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVMESEKVPTLYIKALVMLEDFLNQAMANKEAKKKMSTSNAKALNSMKQKLKKNNRQYEELITKCRENPEVEEEKDDEMETEEDDDDDDDSVIEEDPTKILSGSEDEEDDEEDQEEPDGPWVKQLSKRDKLMDKQFMKDPREITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTRVAKTPAQKLEILFSVISAQFDVNPGLSGHMPISVWKKCVQNMLSIIDILMQNSNIVVDDMVEPDENESQKPADYEGTIRVWGNLVAFVERIDTEFFKSLQCIDPHTREYVERLRDEPMFMVLAQNVQEYLERTGDYKAASKVALRRVELIYYKPQEVYDAMRKLAELSEDGASGDASEEAKVAEEIRGPAAFIVTPEVVPRVPTFPESSRAFMDILVTLIYQYGDERTKARAMLCDIYHHALFDEFYISSDLLLMSHLQDSIQHLDISTQILFNRAMAQLGLCGFRVGLISEAHGCLSELYSGGRVRELLAQGVSQSRYYEKTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNLAGSVHDAKRKVISKNFRRLLEVSERQTFTGPPENVRDHVMAATRALRKGDFQKAFDVIASLDVWKLLRNRDDVLEMVKVKIKVEALRTYLLTYSSSYDSLSLDQLTRMFDIAEGQTHSIVSKMMINEELHASWDQPSGCVIFHDVALTRLQGLAFQLADKLSILAETNERAVEARIGGVDLPMRRRDNQEYAAGAVGGGSRWPDNQGRQGGGSSRAGYSNGGRGEGGGGGYGRDRTGQSRGGNAGGYQSTRYQDAAYRSGRSAYQSGSVRGSQMGASARMVSLNKGVIA 935
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2865032 2869733 + Carg13202-RA Car04g00506 145931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00506 935 MobiDBLite consensus disorder prediction 839 896 - -
Car04g00506 935 MobiDBLite consensus disorder prediction 32 48 - -
Car04g00506 935 MobiDBLite consensus disorder prediction 178 200 - -
Car04g00506 935 MobiDBLite consensus disorder prediction 139 233 - -
Car04g00506 935 MobiDBLite consensus disorder prediction 1 15 - -
Car04g00506 935 MobiDBLite consensus disorder prediction 1 74 - -
Car04g00506 935 MobiDBLite consensus disorder prediction 139 157 - -
Car04g00506 935 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 2 863 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Car04g00506 935 ProSiteProfiles PCI domain profile. 621 793 IPR000717 -
Car04g00506 935 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 48 653 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Car04g00506 935 Coils Coil 147 174 - -
Car04g00506 935 MobiDBLite consensus disorder prediction 207 223 - -
Car04g00506 935 MobiDBLite consensus disorder prediction 49 74 - -
Car04g00506 935 MobiDBLite consensus disorder prediction 158 177 - -
Car04g00506 935 Pfam PCI domain 661 789 IPR000717 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00350 Car-Chr16:2167378 Car04g00506 Car-Chr4:2865032 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00506 K03252 - csv:101203990 1506.12