Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g00518 | ATGGGTTGCGTTTGTTGTAAGCCCTCTGCTATAGAGGATAGCAAGGAAAGTCCGAGGGAGAGGCTGTCGAACAAGACCTCGTCCGACCTGCAGGTGGCAAGAGTGACTTCGTCATCAAGGGAAGAAGCTTATCGATCTAAAGATCATCATGATGGTAATGATGTAAGAGTGACATTGATTAACAAGCAGGTGAATGGGTCGGGTCGATTGCAGAGTGAGATTTTTGAGAGGAAGAGGGAGAAGATGGAGCATATGGCTGCTCAACATCCTTCAATGGGGAGAATTCCGAAGGCAGCAGAGGGAGACCAAATTGCTGCTGGCTGGCCGCCGTGGCTGGCTGCAGTTGCTGGAGAGGCAATCAGAGGGTGGCTACCCCGACGAGCTGATTCTTTTGAGAAATTGGATAAAATTGGTCAAGGGACTTATAGTAATGTATATAGGGCTCGTGACCTTGACCAAAAGAAAATTGTTGCTTTGAAGAAAGTAAGATTCGACAACCTGGAACCTGAGAGCGTCCGCTTTATGGCTAGGGAAATTCACATATTGCGTAGGCTCGATCATCCAAATGTGATAAAGCTGGAGGGTCTAGTTACGTCAAGGATGTCTTGCAGCCTCTATCTTGTATTTGAGTACATGGAACACGATTTGGCAGGACTTGCTTCACACCCTGGTGTGAAGTTTACAGAGGCACAGGTTAAATGTTACATGCAACAACTTTTGCGTGGACTTGATCATTGTCACAGTCACGGAGTTCTGCATCGTGATATAAAGGGTTCCAACCTTTTAATCGACAATAATGGCGTCTTGAAAATTGCAGACTTTGGTTTAGCAAGTTTTTTTGATATCCACCAAAATCAGCCGCTGACAAGTCGGGTTGTAACTCTTTGGTATAGACCGCCTGAGCTTTTACTCGGTGCTACTTATTACGGTACAGCTGTAGATTTGTGGAGTACTGGCTGCATACTTGCTGAATTGTATGCTGGGAAGCCCATTATGCCAGGAAGAACAGAGGTGGAGCAGCTACATAAAATATTTAAACTCTGTGGCTCTCCTTCAGAGGATTATTGGAGAAAATCAAGGCTGCCACATGCAACGATATTTAAGCCCCAACAACCCTATAGACGCTGCGTTGCTGACACGTTTAAGGATTTCCCTGCACCAGCTTTAGCTCTCATTGAGATGTTACTCTCTATAGATCCTGCTGATCGTGGCTCTGCCGCTCTTGCCCTTAAAAGCGAATTTTTTTCAACGAAGCCACTTCCTTGTGATCCTTCGAGCTTGCCGAAGTATCCTCCGAGCAAAGAATTTGATGCCAAGATAAGGGATGAGGAAGCTAGAAGACAAGGAGCGGTAGGAAGCAAGGGACACCGACATGACCTGCAAAGGAAAGATAGAGAGTCTCGAGCTGTCCCTGCACCTGACGCCAATGCCGAGTTAGTCTCATCAATGCAGAAAAGACAATCCAATTCAAAGAGCCGGAGTGAAAAGTTTAATCCACACCCAGAAGAAGCTTCTGGCTTTCCAATTGATCCACCTAGACCATCACAAGGAGCAGAACGAACGGATTCTCAGGTGCGTCATCCTAAGAAAGCCTCACATTCAGGGCCACTTGCTCAGCGGGCCGCTTGGGTAAAGGCTAGTAAGAACCCAGATGACGCTCCGAAAATCTCAACCGGGGCCGATACGTTCACAACTTCAGGACTAGTAGCACCTAGAAGAAGTATGCTGGGGGAAAAGTCTGACGCTTCACAAGGAGAGGTTAAAAAACTAATTGGCAGGTTTCCTGGTTCCTTCAAGGAAACCTCGGAATCATCGATGCTACCCGACCAGAAGTTCTCAAATCACAGTATCGTAGGCTCACACGACAAAGAGAGGTGCAGCACCAAAGACCCTATAGTTGTGGGTTATGGCTCAAAAGGTCATAAGATTCATTACTCTGGTCCATTACTGGTTCCTTCTGGCAACATGGAGCAAATGTTGAAGGACCACGATCGTCATATCCAAGAGGCAGTAAGACGAGCTCGGCTCGACAAGGCCAAGGCACGAAAGGTTCAAGTTGACGGGAAACAGATGTCGACAAATTCATTATTCGTCTCCGGTCGTTAA | 2106 | 46.77 | MGCVCCKPSAIEDSKESPRERLSNKTSSDLQVARVTSSSREEAYRSKDHHDGNDVRVTLINKQVNGSGRLQSEIFERKREKMEHMAAQHPSMGRIPKAAEGDQIAAGWPPWLAAVAGEAIRGWLPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGVKFTEAQVKCYMQQLLRGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASFFDIHQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSRLPHATIFKPQQPYRRCVADTFKDFPAPALALIEMLLSIDPADRGSAALALKSEFFSTKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGAVGSKGHRHDLQRKDRESRAVPAPDANAELVSSMQKRQSNSKSRSEKFNPHPEEASGFPIDPPRPSQGAERTDSQVRHPKKASHSGPLAQRAAWVKASKNPDDAPKISTGADTFTTSGLVAPRRSMLGEKSDASQGEVKKLIGRFPGSFKETSESSMLPDQKFSNHSIVGSHDKERCSTKDPIVVGYGSKGHKIHYSGPLLVPSGNMEQMLKDHDRHIQEAVRRARLDKAKARKVQVDGKQMSTNSLFVSGR | 701 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 2917917 | 2923185 | + | Carg13190-RA | Car04g00518 | 145943 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g00518 | 701 | ProSitePatterns | Protein kinases ATP-binding region signature. | 137 | 160 | IPR017441 | GO:0005524 | |
Car04g00518 | 701 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 251 | 263 | IPR008271 | GO:0004672|GO:0006468 | |
Car04g00518 | 701 | MobiDBLite | consensus disorder prediction | 445 | 560 | - | - | |
Car04g00518 | 701 | MobiDBLite | consensus disorder prediction | 8 | 52 | - | - | |
Car04g00518 | 701 | Pfam | Protein kinase domain | 131 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car04g00518 | 701 | ProSiteProfiles | Protein kinase domain profile. | 131 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car04g00518 | 701 | MobiDBLite | consensus disorder prediction | 445 | 471 | - | - | |
Car04g00518 | 701 | MobiDBLite | consensus disorder prediction | 24 | 39 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car04g00518 | Car16g00361 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g00780 | Car-Chr1:4830404 | Car04g00518 | Car-Chr4:2917917 | 0 | dispersed | |
Car02g00082 | Car-Chr2:545090 | Car04g00518 | Car-Chr4:2917917 | 0 | dispersed | |
Car04g00518 | Car-Chr4:2917917 | Car20g00175 | Car-Chr20:952919 | 5.75E-18 | dispersed | |
Car09g01138 | Car-Chr9:11884689 | Car04g00518 | Car-Chr4:2917917 | 0 | dispersed | |
Car20g00013 | Car-Chr20:77129 | Car04g00518 | Car-Chr4:2917917 | 1.18E-88 | dispersed | |
Car04g01945 | Car-Chr4:12574842 | Car04g00518 | Car-Chr4:2917917 | 0 | transposed | |
Car04g02441 | Car-Chr4:19443442 | Car04g00518 | Car-Chr4:2917917 | 4.54E-110 | transposed | |
Car06g00743 | Car-Chr6:5090310 | Car04g00518 | Car-Chr4:2917917 | 0 | transposed | |
Car16g00361 | Car-Chr16:2244419 | Car04g00518 | Car-Chr4:2917917 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
88772 | PF00069 | Pkinase | 4.90E-69 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g00518 | - | - | csv:101222182 | 1326.61 |