Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00541 ATGGACTCAAGCCAAGGAACACGGGAGTTTTTGGCAGAAATCAATGTGATTACGGTTATAAACCATGATAACCTGGTTAAGTTGCATGGTTGTTGTGTGGAAGGGCAGCACCGGATTTTGGTCTATCCTTACCTGGAAAATGGCAGCCTTGATAAGATGCTTTTTGGTAGAGGACGAGGAAATATCCAATTCAATTGGCAAACGAGGTGTAAAATATGCATTGGCATTGCACAGGGGCTCACGTTCCTTCATGAGGAAGTTCAGCCCCATGTTGTTCACAGGGACATCAAAGCAAGCAATATCCTGCTTGATAAGGACTTAACTGCAAAAATTTCTGATTTTGGTCTTGCTAGATTACTCCCGTCTCACATGACCCACGTCAGTACATGTATTGCTGGGACAGAAGGTTATCTTGCACCTGAATATGCCATCCGGGGGCAAGCGACAAGAAGAACAGATATTTATAGTTTTGGTGTCTTACTCTTGGAGATTGTATGTGGGAGGTACAACATAAACAAACGGTTGCCTGCTGAGGAACCATATCTTCTAGAAATGGTGTGGAAGCATCATGAGACAGGGCAATTGCTGGAATTGGTAGACATATCATTACATGGAGACTTTGTGGCTGAAGAGGCTTGCAGATATTTAAAAGTTGGTCTTCTCTGCACTCAAGATATGCCAACGCTCCGGCCATCTATGTCGACCGTCGTCAAGATGCTAACGGGTGACATTGATATAACTGATCATACAATATCTAGACCTGGAATGCTTTCAGAGTTCATGCTTCAAAAAGATGTACTAGGCAAGAAAGCCGAGCCCAATTCGAAGCTTACATCGACAACTGAAGACTCGGGAAAGCAAAGTGAATCAACTTCATCGTCAGGGTTCATGGACACCTCGTACGGTACCATAACCTTCAATTCGATATTTGATCGTAGTAACTGA 945 43.49 MDSSQGTREFLAEINVITVINHDNLVKLHGCCVEGQHRILVYPYLENGSLDKMLFGRGRGNIQFNWQTRCKICIGIAQGLTFLHEEVQPHVVHRDIKASNILLDKDLTAKISDFGLARLLPSHMTHVSTCIAGTEGYLAPEYAIRGQATRRTDIYSFGVLLLEIVCGRYNINKRLPAEEPYLLEMVWKHHETGQLLELVDISLHGDFVAEEACRYLKVGLLCTQDMPTLRPSMSTVVKMLTGDIDITDHTISRPGMLSEFMLQKDVLGKKAEPNSKLTSTTEDSGKQSESTSSSGFMDTSYGTITFNSIFDRSN 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3040251 3045841 - Carg13166-RA Car04g00541 145966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00541 314 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00541 314 Pfam Protein tyrosine and serine/threonine kinase 4 237 IPR001245 GO:0004672|GO:0006468
Car04g00541 314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Car04g00541 314 MobiDBLite consensus disorder prediction 271 296 - -
Car04g00541 314 MobiDBLite consensus disorder prediction 273 296 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00541 Car-Chr4:3040251 Car04g00590 Car-Chr4:3365743 3.62E-106 dispersed
Car04g00541 Car-Chr4:3040251 Car16g00424 Car-Chr16:2649297 9.45E-138 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88773 PF07714 PK_Tyr_Ser-Thr 3.60E-37 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00541 - - bhj:120074245 539.65