Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00555 ATGGGCAGTGAAAATTTTGGTTTATGGCTATTTTTTATTGCATCTCTTCAGTTTTTTATTAGAACACAGTGTACTATTGTGGGGATTACTTATGTTCGTGAACCTAGTGTCAAAGGAGCTGTTTGTTTGGATGGAAGCCCTCCAGCTTATCACTTGAGTGAAGGGTTAGGCGCTGGTGTTAACAATTGGTTGATTCAGCTAGAGGGAGGAGGATGGTGCAGCGATGTCAAGACTTGCGTCCTGCGTCGGGATACTCGTTTAGGTTCGTCTAAGGCCATGGCTACCGAGCTTGCGTTTTCGGGGCTTTTGAGTAACCAGCGAGAATTCAATCCAGATTTTTATAACTGGAATAGAATCAAAATTCGATACTGCGATGGATCTTCGTTCACCGGAGACGTCGAAGCCGTTGATCCCGCAACCAATCTGCATTTCAGAGGAGCAAGAATTTTTCGGGCCGTGATCGATGATTTACTCGCCAAGGGAATGAAGAACGCGAAGAACGCTATTATCTCGGGATGTTCGGCCGGTGGATTAGGTTCCATTTTGCATTGTGATACCTTCAAATCTTTACTTCCTCCTACTACCAAAGTAAAGTGTGTCTCAGATGCAGGATACTTTGTCAACGTGAAAGATGTCTCTGGAGCACGGCATATCGAGGCATTCTTTAGCGATATAGTCACCACTCATGGTTCAGCTAGGAATTTGCCTGTACAATGTACTTCAAAAATGAAACCCGAGTTGTGTTTCTTCCCCCAAAATGTGATTCAGCTCGTTCGGACTCCAATCTTTATTGTAAATGCAGCTTATGATTCATGGCAGGTAAGGAACATTCTGGTTCCCGGTGTTGCCGATCCACGCCATATTTGGAATAACTGCAAGAACGACATCAAAAACTGCTCGTCTGTTCAGCTTGAAACCTTACAAGATTTCAGGGATAAGTTTTTGAATGCATTGAATGGCTTTGGACACCCTTCATCAAGAGGATTGTTCATAGATTCTTGCTATGCGCATTGCCAAACTGAAATGCAGGAGACATGGCTAAGAGCAGACTCTCCCGAGATCAGTAACACGCCCATTGCAAAGGCGATTGGAGACTGGTTTTTCGACAGGAGTGTGTTCCAGAAGATCGATTGTCCATACCCGTGTAACCCGACATGCCATAACCGCATTTTTTAA 1176 44.3 MGSENFGLWLFFIASLQFFIRTQCTIVGITYVREPSVKGAVCLDGSPPAYHLSEGLGAGVNNWLIQLEGGGWCSDVKTCVLRRDTRLGSSKAMATELAFSGLLSNQREFNPDFYNWNRIKIRYCDGSSFTGDVEAVDPATNLHFRGARIFRAVIDDLLAKGMKNAKNAIISGCSAGGLGSILHCDTFKSLLPPTTKVKCVSDAGYFVNVKDVSGARHIEAFFSDIVTTHGSARNLPVQCTSKMKPELCFFPQNVIQLVRTPIFIVNAAYDSWQVRNILVPGVADPRHIWNNCKNDIKNCSSVQLETLQDFRDKFLNALNGFGHPSSRGLFIDSCYAHCQTEMQETWLRADSPEISNTPIAKAIGDWFFDRSVFQKIDCPYPCNPTCHNRIF 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3139987 3143279 + Carg13152-RA Car04g00555 145980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00555 391 Pfam Pectinacetylesterase 24 372 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00555 Car-Chr4:3139987 Car10g01047 Car-Chr10:10771138 2.13E-137 dispersed
Car11g01011 Car-Chr11:7073542 Car04g00555 Car-Chr4:3139987 7.23E-149 transposed
Car16g00460 Car-Chr16:2922427 Car04g00555 Car-Chr4:3139987 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00555 K19882 - csv:101214431 690.649