Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00561 ATGTTCTTCCCTTTCATCCTCGCCGCCGCCGCCATCTTCTTCTTCTTCCATTCTCTTTTCAAATTCTCCGCCCCTGTTCGTCGGAAACCTCCTCTTCCACCGGGCTCAATGGGCTGGCCTTACATCGGTGAAACCCTCCAACTCTACTCTCAAGATCCCAACGTCTTCTTTGCCTCCAAGAAGAAGAGATATGGTCCAATTTTCAAGTCCCACATATTGGGTTATCCTTGTGTGATGCTTTCAAGTCCCGAAGCTGTGAAATTTGTGTTGGTTACTAAAGCCCATCTCTTTAAGCCGACATTCCCAGCTAGTAAAGAAAGAATGTTGGGAAAAAATGGCATCTTTTTTCACCAAGGTGAGTATCATGCCAAATTGAGGCGCCTCGTCCTCCGAACATTCATGCCTGAATCCATAAAAAACATCGTACTCACCATCGAATCCATCGCTAAGAACACCCTACAATCATGGAATGGACAATTGATCAACACCTTCCAAGAAATGAAAATGTTCGCATTCGAGGTTTCGTTGCTATCAATATTTGGAAAAGATGAAGCTCTTTACTTCGAAGATCTTAAACGATGCTATTACATTCTTGAAAAAGGGTACAATTCGATGCCCATAAACTTGCCAAGAACACTCTTCCACGAGGCCATGAAAGCTAGGAAGGATCTAGCGCGTATCTTAAACAAGATCCTCACAACCAGGAGGGAAACGAAGCGGGATTACAACGACCTCCTCGGATCATTCATGAGCGAAAAGGAAGGCCTCACCGACGAACAGATAGCCGACAATGTCATCGGCATCATCTTCGCAGCTCGCGACACGACAGCGAGTGTTCTAACATGGATCTTGAAGTTCCTAGGAGAAAACCCAAGTGTTCTTCAAGCTGTTACCGATGAACAAGAAGCAATAATGAATGAAAAACAGAGTAGAGAAGATAATAATCTCACCTGGGGTGACACGAGAAACATGCCGATTACTTCAAGGGTGATTCAAGAAACTCTAAGAGTTGCTTCGGTTTTGTCATTTACTTTCAGAGAAGCAGTGGAAGATGTTGAATATGACGGGTATTTGATTCCAAAGGGATGGAAAGTTTTGCCTCTGTTCAGGAACATTCATCGTAGCTCTGAGAATTTTGCTCAGCCTGACAAGTTTGATCCTTCGAGATTTGAGGTGGCTCAAAAACCCAATACTTACATGCCATTTGGCAATGGGACCCACTCCTGTCCGGGAAATGAATTGGCCAAGCTGGAGATGTTGGTTTTACTCCATCATTTAACCACAAACTACAGGTGGAATGTAGTGGGAGCTGAAGAAGGGATTCAATATGGTCCATTTGCTCTTCCCCACAACGGATTGCCCATTAGAATATCTCTC 1377 44.23 MFFPFILAAAAIFFFFHSLFKFSAPVRRKPPLPPGSMGWPYIGETLQLYSQDPNVFFASKKKRYGPIFKSHILGYPCVMLSSPEAVKFVLVTKAHLFKPTFPASKERMLGKNGIFFHQGEYHAKLRRLVLRTFMPESIKNIVLTIESIAKNTLQSWNGQLINTFQEMKMFAFEVSLLSIFGKDEALYFEDLKRCYYILEKGYNSMPINLPRTLFHEAMKARKDLARILNKILTTRRETKRDYNDLLGSFMSEKEGLTDEQIADNVIGIIFAARDTTASVLTWILKFLGENPSVLQAVTDEQEAIMNEKQSREDNNLTWGDTRNMPITSRVIQETLRVASVLSFTFREAVEDVEYDGYLIPKGWKVLPLFRNIHRSSENFAQPDKFDPSRFEVAQKPNTYMPFGNGTHSCPGNELAKLEMLVLLHHLTTNYRWNVVGAEEGIQYGPFALPHNGLPIRISL 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3175630 3178101 - Carg13144-RA Car04g00561 145986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00561 459 Pfam Cytochrome P450 33 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g00561 459 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 402 411 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00561 Car-Chr1:3303511 Car04g00561 Car-Chr4:3175630 0 dispersed
Car01g00562 Car-Chr1:3307049 Car04g00561 Car-Chr4:3175630 2.43E-06 dispersed
Car04g00561 Car-Chr4:3175630 Car11g01089 Car-Chr11:8536333 0 dispersed
Car16g00453 Car-Chr16:2884958 Car04g00561 Car-Chr4:3175630 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00561 K09843 - csv:101212508 809.29