Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00565 ATGGTGTTGGGTAGATTTAGGGATGTTTTCTCGTCTGTAGCCAGTCGTTTGTCGGGCCGACAGTCTTCTACGGATGCGTTTAACTCATCGTCGCCTCCGTTGATCGATTCTTCGCCTCCTCTTGTTGCTGGATTTTCAAGTCCTGCGCTTAAGAACAATATAAGGCTTTCATCGTCTCTTCAGGATCTCTCTGCTTACCGTAGACTTGATCTCGAAGAGGGTAATCATGGACTTGGGAATGCAGCTTCTGATTTTAGACCGCTCCAGCGAGAGAATGCTGGCTCTAGTTTCTCGAAGGAGAAGGCATTGCCTGGAGGCTCCTCCCGGTGGCCGATCAAGAAGTTGGTGCGAACAATTGTTCTTTTTCTGTGTCTTTTGCTCGTTTGTTTTCTAATTTATACGGTTTCTATGTATATTTATTCATATTGGTCTCAAGGAACACCAAGATACTTTGTGGTGCTTGACTGTGGAAGTACTGGCACTCGAGCTTATGTATATCAAGCAAATATTAATTATAAGAAAGATGGAGCCCTTCCCATTGCCATCAGGTCCTATACAGGACAGAAGAAGAAATCGAAGTCTCAGAGCGGACGGGCTTATGACCGAATGGAAACAGAACCAGGGCTCGATAAGTTGGTTCGTAATGTGACTGGTTTGAAGAAAGCAATTAAACCTCTGCTTCATTGGGCTGAGAAGCAGATTCCTAAGCGTGCCCACGAAAGCACTTCTCTTTTCCTCTATGCGACCGCTGGAGTTAGAAAACTACCACCTGCAGATTCGAAATGGATTCTGGACAATGCTTGGTCTATATTAAAGAGTTCACGCTTTCTTTGCCAGAGAGAATGGGTTAAAACCATTACAGGTACAGAAGAGGCTTACTATGGATGGATTGCCCTTAACTATCAAAAACAATTGTTGGGGGTTAAACCAAGGGAACTAACATATGGGGCACTTGATTTGGGAGGGTCTTCCTTGCAAGTAACTTTTGAAAGCAAGGAACGAAATGAGTCGAGTTTGAACATTAGAATTGGAAATGTTGATTATCATCTTAATGCTTATTCGCTTACCGGGTATGGTTTAAATGATGCATTTGGGAAGTCTGTTGTCCATCTATTAAGAAGGATTCAAGAACATGAAAAGCTAGACCTGTCTAAATTTAAGCTTAACCACCCTTGCCTGCATTCTGGGTACAATGAGAAGTATACCTGTAACCAGTGTGGAAAATTGTTGGGTAGAGGAGGTAATTCAGGAATTTCTCTAAGGCTGATTGGTGCTCCGAATTGGGAAGAATGTTCTGCACTTGCTAAAGTTGCAGTAAATTTTTCCGAATGGTCAAATACGAGCGCTGGACTTGATTGTGATGTGCAACCATGTGCCATAACTAATGACTACCCTCCACCATATGGGAATTTTTATGCCATTTCTGGTTTCTTCGTGGTGTTTCGATTTTTCAATCTGACTTCAGAGGCTACACTTGATGATGTATTAGAAAAGGGTCGCAAATTTTGTGAGAAACCTTGGGAAGTTGCACGGGCTAGTGTTGCTCCACAGCCCTTTATTGAGCAATACTGCTTTAGGGCACCATACGTAGTCTCGCTCCTTAGAGAGGGGTTGCATATTACTGATAAACAAATTATTATCGGTTCGGGGAGTACAACTTGGACTCTTGGGGTTTCACTGTTGGAGGCGGGGAAGACGGCTGCAGTTACAACCAGGCTACAGCTCCATGGTTATAAAATTTTTAAAATGAAGATAGATCCTCTAATTCTTATCGTCGTTTTGTTCACGTCATTGTTTTTCCTGCTTTTTGCATTATCCTGTGTAGGTAGTGCAATACCTAGATTTTTTCGGAGACCCTATCTCCCAATTTTCCGGCATAATACTGTCTCTACCACATCTGTTCTAAACATTCCATCTCCTTTTCGGTTACAGCGGTGGAGTCCAATGAGTTCTGGGGATGGCAGAGTGAAGATGCCACTGAGTCCAACAGTTAAAGGCTCTCAAGAAAGACCCTTTGGCTTAGGACATGGCTTTGGCAGCAGTAGTGGCATCCAACTTATGGAGTCATCCATGCACCGGTCATCCAGCAGTATGGTCTCGCATAGCTATTCTTCAAATAGTCTTGGCCAAATGCAATTTGACAATAACAGCGTCGGTTCGTTCTGGACCCCACGTCGTAGTCAGATGCGCCTTCAAAGTAGACGTTCGCAATCTCGAGAGGATCTGTCATTGACGTCGGCTGAAACGCACATGGTGAAGGTTTAG 2265 43.71 MVLGRFRDVFSSVASRLSGRQSSTDAFNSSSPPLIDSSPPLVAGFSSPALKNNIRLSSSLQDLSAYRRLDLEEGNHGLGNAASDFRPLQRENAGSSFSKEKALPGGSSRWPIKKLVRTIVLFLCLLLVCFLIYTVSMYIYSYWSQGTPRYFVVLDCGSTGTRAYVYQANINYKKDGALPIAIRSYTGQKKKSKSQSGRAYDRMETEPGLDKLVRNVTGLKKAIKPLLHWAEKQIPKRAHESTSLFLYATAGVRKLPPADSKWILDNAWSILKSSRFLCQREWVKTITGTEEAYYGWIALNYQKQLLGVKPRELTYGALDLGGSSLQVTFESKERNESSLNIRIGNVDYHLNAYSLTGYGLNDAFGKSVVHLLRRIQEHEKLDLSKFKLNHPCLHSGYNEKYTCNQCGKLLGRGGNSGISLRLIGAPNWEECSALAKVAVNFSEWSNTSAGLDCDVQPCAITNDYPPPYGNFYAISGFFVVFRFFNLTSEATLDDVLEKGRKFCEKPWEVARASVAPQPFIEQYCFRAPYVVSLLREGLHITDKQIIIGSGSTTWTLGVSLLEAGKTAAVTTRLQLHGYKIFKMKIDPLILIVVLFTSLFFLLFALSCVGSAIPRFFRRPYLPIFRHNTVSTTSVLNIPSPFRLQRWSPMSSGDGRVKMPLSPTVKGSQERPFGLGHGFGSSSGIQLMESSMHRSSSSMVSHSYSSNSLGQMQFDNNSVGSFWTPRRSQMRLQSRRSQSREDLSLTSAETHMVKV 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3210360 3213292 + Carg13140-RA Car04g00565 145990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00565 754 MobiDBLite consensus disorder prediction 724 754 - -
Car04g00565 754 Pfam GDA1/CD39 (nucleoside phosphatase) family 148 563 IPR000407 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00565 Car-Chr4:3210360 Car05g00773 Car-Chr5:6011040 2.87E-36 dispersed
Car13g00717 Car-Chr13:8363754 Car04g00565 Car-Chr4:3210360 8.62E-93 transposed
Car16g00450 Car-Chr16:2840467 Car04g00565 Car-Chr4:3210360 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00565 - - csv:101219987 1251.5