Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00580 GAATATAAAAGTAATTTAATCTTAAAATTCAAAATTCCGGTGCATTTTAATATTGAGATTCAGGTAGGGGCGGAGTTCATTGGAACATACATAATGCTATTCTCCGCAGCGGCGGCGCCCATTCTGAACGAGAAATATCAGGCGGCGGAGAACGGCCTGATGACGAGTGCGATATGCGCAGGACTCGCGGTGATGGCCGTAATCCTCTCCATCGGTCACATCTCCGGCGCTCACTTGAATCCCTCTGTCACTGTAGCCTTCGCCGCTCTCCGTCACTTTCCATGGCTTCACGTCCCTCTCTACATCACCGCTCAGATTTCCGGATCTATTTCCGCCGCTTTCAGCCTCAAGATCGTCTTCCGTCCGTTCATGTCCGGCGGCGCCACCGTGCCCTCCGTCGGCACCGGTCAGGCCCTCGCGATCGAGTTCATCGTCACATTCTTCCTCATGTTCGTCATTGTTGCTGTCGCCACTGATACCAGAGCGGTCGGGGAATTGGCCGGAATTGCAATCGGAGGCATGGTAATGCTCAACATTCTCGTCGCCGGGCGCGCCACCGGCGGTTCGATGAACCCGGCGAGGACCATAGGCCCAGCCATCGCAACAGAAAATTTCAAAGGTCTATGGATATACATAGTAGCACCCACAGCCGGAGCAGTGGCTGGTGCAGCCGGCTACACAGCCGTGAAGCTCCGTCAAGACACGGCAGCGGAATCAGCGCGGCGAAATGAAGGAAGCCTCAGCCGATTGGGAGAAAGCTCGCAAGCGGTGGTCCCGTCGAGATCCAGTGGAAACTCGGCATGGAAGCTGGACGGCGGTTCGTGGCTGTGTTTAGCCGGAGAGTGCAGGAAGGAGTGCTCGGAATTGGAGCATTTGAATGTGATTCTGTGTTACAAGGAAGCTAATCAGATCGCAGAATTTCTGGGCAAGAACGAAGCAGGCGACGAGGGTTTGGTATAA 960 54.58 EYKSNLILKFKIPVHFNIEIQVGAEFIGTYIMLFSAAAAPILNEKYQAAENGLMTSAICAGLAVMAVILSIGHISGAHLNPSVTVAFAALRHFPWLHVPLYITAQISGSISAAFSLKIVFRPFMSGGATVPSVGTGQALAIEFIVTFFLMFVIVAVATDTRAVGELAGIAIGGMVMLNILVAGRATGGSMNPARTIGPAIATENFKGLWIYIVAPTAGAVAGAAGYTAVKLRQDTAAESARRNEGSLSRLGESSQAVVPSRSSGNSAWKLDGGSWLCLAGECRKECSELEHLNVILCYKEANQIAEFLGKNEAGDEGLV 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3309905 3311080 - Carg13125-RA Car04g00580 146005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00580 319 MobiDBLite consensus disorder prediction 240 265 - -
Car04g00580 319 Pfam Major intrinsic protein 21 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00580 319 ProSitePatterns MIP family signature. 78 86 IPR022357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00580 Car-Chr4:3309905 Car15g01216 Car-Chr15:9490964 2.19E-95 dispersed
Car04g00580 Car-Chr4:3309905 Car02g00717 Car-Chr2:5325534 3.17E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00580 K09874 - fve:101305291 303.138