Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00590 ATGGGTTCAGGGTCAAGATTAAAGCAGCTATGTCGTTTGAATTTTCTAAGGGATGTATGCGTACCTGGATGGAAGAAGCCACATGCCAACACTATGTGTTCAAGTTCCTTAGCTCCGAATCCTTCTGTTTCTCTACTCATTTCACTTTCTAAGTCTGCAAGCTCTCTCTCTGTGTTTTCATTTGCTTTTGTTGTTCTTGGAGTTTGGAACGAACTAGGTGAATTGGATGGCGATGAACTTGAAATTAGAAGTGGAATTTGGGTTCAGGAAACCTATAAATTAGTTGTTTCTCTGGAGTGTTCTTGGCTTGATGATGCTTACCATTATCTTTCATGGCCGCTTCTCGAATCTTATCACCAGGCGAAATCCCCAACGGGAAGCGTTGGCAACGACGAAGAACTTTCAGGCATGCACAATGTTAGACTATATACATACAAAGAGCTAAAAGTAGCAACCCAAGATTTCAGCTTAGCGAATAAAATAGGGGAGGGCGGTTTCGGTTCTGTATACAAGGGAAGGCTAAGAAATGGAAAGCTTGCTGCCATAAAAGTTCTTTCGGCTCAATCGAGACAAGGATTGAAGGAATTCTTGGCTGAAACTAAAGTCATCTCTGTGATAGAACATGAAAATCTGGTTCAGCTTTATGGCTGCTGTGTGGAGAATAATCATAGAATTCTTGTCTATAATTACCTTGAGAACAATAGCCTTGCACAAACTCTTCTTGGGCGAGGTTCCAGTAGTCTCCAGTTTGATTGGCGAAGTAGGTCTCGGATTTGCATTGGAATTGCACGCGGGCTTGCCTTCCTTCATGAGGATGTACAGCCATATATCATTCATAGAGATATCAAAGCAAGTAACATTCTTCTTGACCGTGATCTCACTCCTAAGATTTCAGATTTCGGCCTTGCGAGGCTCGTTCCAGCCAACATGTCTCACATCAGTACCGGAGTGGCAGGAACAATTGGTTACCTGGCACCCGAATATGCGATAAGAGGGCAGGTGACGCGAAAATCAGATATTTACAGTTTCGGCGTCCTCCTTGTGGAAATAGTCAGCGGGAGATGCAACAAAAACACGAAGTTACCAATTGGAGAGCAATATCTTCTCGAAACGGCATGGAATCTTTATGAGCAAGGAGAGCTCGTTCTGCTCGTAGATATGTCGTTAAACGGCGACTTCGATGCTGAGGAGGCTTGTAAATATATTTCATCTGAACTTGAGTATGCCTGTCTATCGGAAAAATTTATTAAGGATAGCAATCCATGA 1266 42.81 MGSGSRLKQLCRLNFLRDVCVPGWKKPHANTMCSSSLAPNPSVSLLISLSKSASSLSVFSFAFVVLGVWNELGELDGDELEIRSGIWVQETYKLVVSLECSWLDDAYHYLSWPLLESYHQAKSPTGSVGNDEELSGMHNVRLYTYKELKVATQDFSLANKIGEGGFGSVYKGRLRNGKLAAIKVLSAQSRQGLKEFLAETKVISVIEHENLVQLYGCCVENNHRILVYNYLENNSLAQTLLGRGSSSLQFDWRSRSRICIGIARGLAFLHEDVQPYIIHRDIKASNILLDRDLTPKISDFGLARLVPANMSHISTGVAGTIGYLAPEYAIRGQVTRKSDIYSFGVLLVEIVSGRCNKNTKLPIGEQYLLETAWNLYEQGELVLLVDMSLNGDFDAEEACKYISSELEYACLSEKFIKDSNP 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3365743 3368526 + Carg13115-RA Car04g00590 146015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00590 421 ProSiteProfiles Protein kinase domain profile. 155 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00590 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Car04g00590 421 Pfam Protein tyrosine and serine/threonine kinase 157 353 IPR001245 GO:0004672|GO:0006468
Car04g00590 421 ProSitePatterns Protein kinases ATP-binding region signature. 161 183 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00590 Car16g00424 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00541 Car-Chr4:3040251 Car04g00590 Car-Chr4:3365743 3.62E-106 dispersed
Car04g00590 Car-Chr4:3365743 Car07g00915 Car-Chr7:5071651 6.28E-104 dispersed
Car16g00424 Car-Chr16:2649297 Car04g00590 Car-Chr4:3365743 3.34E-168 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88775 PF07714 PK_Tyr_Ser-Thr 9.90E-45 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00590 - - csv:101216433 477.633