Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00596 ATGGAGGACGATTCAGATCTTGACTTCAGCTTCACCAGCACCATCTCCACCTCCACCGCCCGCAGCAGTTTAACTCTCAGCTTTAACGAATCCCGTGGCTTCTCCGCCCTTAACCTCCGTCCCCACCGCCACTCCGACTCACACTGGTCCGCCATCAAAGCTGCCACTACTCTTTCCTCCGATGGCCACCTCCACCTCCGCCACCTGAAACTCATCAAACACCTCGGCACTGGCAACCTCGGTCGGGTTTTCCTCTGCCATTTGAGAGACAACGATCACGCCAATTTCGCCCTTAAGGTCGTTGACAGAGACGCTTTAAGTAACAAGAAGCTTTTGCAGGTTCAAACGGAATCCGAGATTCTCGCTTTGCTCGACAACCCTTTTCTCCCTACTCTCTACGCGCGTCTCGACGTCTCTCACTACACGTGCCTCCTTATTGACTACTGCCCAGCCGGTGACCTCCACTCTCTCCTCCGCAAACAGCCTGGAAACCGCCTCTCCATTTCGGCGGCGAGATTCTTCGTCGCTGAGGTTCTGGTGGCGCTTGAGTATCTTCACGCGCTTGGGATTGTGTACCGGGATCTCAAGCCTGAGAACGTTCTTTTGCGTGAGGATGGCCACGTCATGCTCACTGATTTCGATTTGTGTTTCAAGTCCGACGTTGTCCCCACTTTTCACACGTCGACACAGCGGGGACCACAGGGTACTGCCTCCTGCTTTGGGATGAGGACCGCGGCGGAGGAGATTGTCGGGGAGTTCGTGGCGGAGCCGACGACGGCCTTTTCGAAGTCATGTGTAGGGACTCATGAGTATTTGGCGCCTGAGTTGGTAACCGGCGGTGGCCACGGAAACGCCGTCGACTGGTGGGCGTTTGGGGTGTTCATTTACGAGCTGCTACACGGAACGACGCCGTTTAAGGGAGTGAACAAGGAGGGTACGCTTAGAAACATAGCGTCTACAGAAGGGGTGAAGTTCAGGGCGGCCATGGAGGAAGAGGAAGGTATAGCAGAGGCGAGGGATCTGATAGAGAGACTACTGGTGAAAGATCCGGCGAGACGGTTGGGATCCGGGAAAGGGGCGACGGAGATCAAACGGCATCCATTCTTCAACGGTATAAAATGGGCGTTAATCCGGATGTACCGACCGCCGGAGGTGTACGGATTGATGAGAAAAGCCAGATCACACGTGAGCCACGTGCGTGACGTCAACCACCGCATGCGGCGTCGGAGCTGGTGGAACTGGAGAAAGCTCAGTAACTATTTAATTAAAAACGGAAATTCCAGTAAATCTCATACCAATACCAATTCCAATACTAATAATTACAGATTTAACGCCAAAAATAAAATGGCTTAA 1353 53.44 MEDDSDLDFSFTSTISTSTARSSLTLSFNESRGFSALNLRPHRHSDSHWSAIKAATTLSSDGHLHLRHLKLIKHLGTGNLGRVFLCHLRDNDHANFALKVVDRDALSNKKLLQVQTESEILALLDNPFLPTLYARLDVSHYTCLLIDYCPAGDLHSLLRKQPGNRLSISAARFFVAEVLVALEYLHALGIVYRDLKPENVLLREDGHVMLTDFDLCFKSDVVPTFHTSTQRGPQGTASCFGMRTAAEEIVGEFVAEPTTAFSKSCVGTHEYLAPELVTGGGHGNAVDWWAFGVFIYELLHGTTPFKGVNKEGTLRNIASTEGVKFRAAMEEEEGIAEARDLIERLLVKDPARRLGSGKGATEIKRHPFFNGIKWALIRMYRPPEVYGLMRKARSHVSHVRDVNHRMRRRSWWNWRKLSNYLIKNGNSSKSHTNTNSNTNNYRFNAKNKMA 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3400951 3402303 + Carg13109-RA Car04g00596 146021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00596 450 MobiDBLite consensus disorder prediction 425 450 - -
Car04g00596 450 Pfam Protein kinase domain 71 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00596 450 ProSiteProfiles Protein kinase domain profile. 69 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00596 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00596 Car16g00420 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00596 Car-Chr4:3400951 Car12g01194 Car-Chr12:11375556 3.34E-117 dispersed
Car16g00420 Car-Chr16:2621183 Car04g00596 Car-Chr4:3400951 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88776 PF00069 Pkinase 3.40E-52 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00596 - - bhj:120087146 717.998