Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00606 ATGTGGGAGGCCAAGAAGATCCACTTTTTTACTGAATATGGGGATGCTAATAGATATAAGATTCTTGAAGTTATAGGCAGGGGAAGTTACGGAGTTGTTTGTTCTGCTATAGACGTGCAAACCAAAGAGAAAGTTGCAATAAAGAGAATTCATGACATATTTGATCATGTATCTGATGCTGTTCGAATCCTTCGTGAAGTTAAGTTGCTTAGATTGTTGCGGCATCCTGATATTGTTGATATCAAGCACATCATGTTGCCACCTTCTAAAAAGGAATTTAAGGACATTTATGTGGTGTTTGAGCTTATGGAATCTGATCTTCATCAAGTTATTAAAGCAAATGATGATTTGACCCGTGAACATCATCAGTTCTTCCTCTATCAAATGCTACGTGCATTGAAATTCATGCATACAGTGTTTCTAAGTGATGCTGTTTGCAGGACTATGTTGCTACTAGATGGTATAGAGCTCCAGAGCTGTGTGGATCGTTCTGTTCAAAGCAACAATGTCCCCCCTGCTCCTCCCTCCACCACCATACAAGGAAAGATCAGAGCAACATCTTGTAGTGATTTACTGGCCATGTATACTCCCGCGATAGATATTTGGAGCATTGGCTGCATATTTGCTGAGGTTTTGATAGGGAAGCCACTGTTTCCTGGTAAAAGTGTTGCCCATCAATTGGAGTTGATTACTGATCTTCTTGGGACTCCCTCATTGGAAATCATTGCAGGAGTTCGGAACGAAAAGGCCAGGAAATATTTGACCGAAATGAGAAAGAAATCTCCAGTGCCGTTTTCACAAAGATTTCCCAATGCGGATCCTGCAGCCATCCGCTTATTACAAAGACTATTAGCATTTGATCCGAAGGATCGACCATCCGCTGTGGAGGCTCTGGCTGATCCTTACTTTAAGGGCCTAGCTAAAGTTGATAGAGAGCCTTCTTGTCAGCCAATATCAAGAGTGGAATTTGAGTTTGAGAGACGGAAATTAACAAAGGATGACATAAGGGAACTATTATACAGAGAAATATTAGAATATCATCCTCAAATTCGCGAAGATTATTTGAATAGAACTGAGACTACAAAGCTCCTCTATCCTAGTACTCCTATCATTGTCAGCGTTACAGGTCATTTTAGAAGCCAATTCACCTACCTCAAGGAGAATGGTGCTAAAAGTGCACCGGTTTTGCCTCTCGAACGGAAACACTTCTCCCTCCCACGTATAAGTTTTGTGTTCTTACAAGCTCAGTTTGCGAATCGTCTTCTTAGGTCCACGGTTTGCACAAATTTGGATTCACCTGATCGTGAACCGGTTCGGCGAAATCCGAAAGTCTCTAATAACAGCATGGGATTATCTGATAGAAAATTTGGGAATCCATCAAAGGCTCATCCTCCTCCCAAAGTGCCTACTGGACGAGTTTCCGGGCCCGTTCTCCCATACGAGAACAGAAACATAACAAATGTTTATTCGAGACTAACGGCACAAATTAGAAGTTTGGATTTGTGA 1506 41.63 MWEAKKIHFFTEYGDANRYKILEVIGRGSYGVVCSAIDVQTKEKVAIKRIHDIFDHVSDAVRILREVKLLRLLRHPDIVDIKHIMLPPSKKEFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKFMHTVFLSDAVCRTMLLLDGIELQSCVDRSVQSNNVPPAPPSTTIQGKIRATSCSDLLAMYTPAIDIWSIGCIFAEVLIGKPLFPGKSVAHQLELITDLLGTPSLEIIAGVRNEKARKYLTEMRKKSPVPFSQRFPNADPAAIRLLQRLLAFDPKDRPSAVEALADPYFKGLAKVDREPSCQPISRVEFEFERRKLTKDDIRELLYREILEYHPQIREDYLNRTETTKLLYPSTPIIVSVTGHFRSQFTYLKENGAKSAPVLPLERKHFSLPRISFVFLQAQFANRLLRSTVCTNLDSPDREPVRRNPKVSNNSMGLSDRKFGNPSKAHPPPKVPTGRVSGPVLPYENRNITNVYSRLTAQIRSLDL 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3477372 3481177 - Carg13099-RA Car04g00606 146031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00606 501 Pfam Protein kinase domain 19 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00606 501 Pfam Protein kinase domain 194 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00606 501 ProSiteProfiles Protein kinase domain profile. 19 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00606 501 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Car04g00606 501 MobiDBLite consensus disorder prediction 428 475 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00606 Car-Chr4:3477372 Car11g01641 Car-Chr11:12935511 0 dispersed
Car16g00405 Car-Chr16:2507627 Car04g00606 Car-Chr4:3477372 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88777 PF00069 Pkinase 3.30E-21 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00606 - K04371 csv:101213897 739.184