Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00657 ATGTTGGACACGTTGGCCAATCTGGGTCTGCTCTTCTTCTTATTTCTCGTTGGGCTCGAGCTGGATCCGAAGTCCCTCCGCCATACCGGAAAGGCCGCCATGGGCATCGCCGTCGCCGGAATCACCCTCCCCTTCCTCCTCGGCATCGGCACCTCCTATGTCCTCCGTTCCACCATCTCCCAAGGCGTCCATGCCCCTCCCTTCCTTATATTCATGGGCGTAGCTCTCTCCATCACCGCCTTCCCTGTCCTGGCCCGTATTCTGGCCGAGCTCAAGCTTTTAACCACTAACGTCGGCCGTATGGCTATGTCCGCCGCCGCTGTCAACGATGTCGCCGCCTGGATCTTCCTCGCTCTCGCCATCGCCCTCTCCGGTACTGGCAGCTCCCCTCTCGTCTCCCTCTGGGTCTTCCTCTTTGGGTTTGCTTTTGTCCTGTTCTGCTTCTTCACTCTGCCGCCCATTTTCCGGTGGATGTCCAGTCGCTGCTCCGACGGCGAACCCATCAGCGAACTCTATATTTGCGCTACCTTATCCATCGTCCTCGCCGCCGGTTTCTTCACCGATTTAATCGGAATTCACGCCCTCTTTGGCGCCTTCGTTGTCGGCGTTCTTGTACCAAAAGACGGCCCACTAGCCGGCGCTCTCGTCGAGAAAGTCGAAGGTCTGGTCTCCGGTCTCTTCCTCCCTCTTTATTTCGTTTCTAGCGGATTGAAAACCAACATCGCCACCATCAAAGGCGCCCAATCGTGGGGTCTCCTCGTTCTCGTCGTTTTCACCGCTTGTTTCGGGAAAGTCCTGGGCACCATCGCCGTCGCACTCTTCTGCAAAATGCCACTCCAGGAATCAATCGCTTTAGGATTCTTGATGAACACGAAAGGGCTCGTGGAATTAATCGTCCTCAACATCGGGAAAGACAGAAAAGTTCTGAACGATCAAACTTTTGCAATTCTCGTTCTAATGGCTATCATCACAACCTTCATCACAACCCCAATCGTGATGGCGGTTTACAAACCGGCAAAGAGAAAAAGCAAATCTGAATACATAAACAGAACAATTGAGCGTGAGGATCCCAATTCAGAGCTGCGGATTTTGGCCTGTTTTCACTCTGTTACCAACATTCCTTCGGTTTTAAACTTGATTGAGGCGTCTCGTGGGGCGGAAGGAAAAGAATGGGTTGGGCGCCGGGTTTGCGTTTATGCTATGCATTTGATGGAGCTGACGGAGAGGTCGTCGGCCATTTTTATGGTCCACCGAGCTCGGAAGAATCAGCTTCCGTTCTGGAATAAAGGGGGGAAGGCTGATTCCGATCAAATCGTGGTGGCTTTTGAGGATTTTGGGCAGCTTAGTCGGGTGTCTATACGTCCAATGACGGCCATATCTCCACTATCTAGCATTCATGAAGATGTCTGCAACAGCGCCGAGCGGAAACGAGCAGCCATTATCATCCTCCCATTCCACAAACACCAAAGGTTTGATGGATGTTTGGAGACAACACGAGGCGATTTCCAATGGGTCAATCAAAAAGTTCTCGAACAACCACCTTGCTCTGTTGGGATCTTGGTCGACCGAGGATTTGGAGGTGGGTCTCACATCAGCGCTAGCAACGTCTCTTCCACCATAACCATCTTCTTCTTCGGCGGCCGTGACGACCGTGAAGCACTAGCCTACGGTCGGAGAATGGCCGAACATCCCGGAATAACGCTAAACGTTATCCGCTTCCTTCCAAGCCCCGACATGGTGGTAGAATCCATTGTAGTTGACATTAACAAATACGACACAAATGATGTTTCAGCAGGCACAGATGAGAGGGTACTGTCGGAGTTGAAGATGAAGAAAACAGAGGAGAAGTCGATTAAATATGAAGAGAGGGTTGTGAGCAATAGCTGCGACGCCATTGATGTAATGAGGGAGTTTGGTAGATGCCATTTGATATTGGTGGGTCGAATGCCAGAAGGGCGAGTAGTGGAGAGCTTTCATTTGAAGAGTGTAGAATGTCCTGAGTTGGGGCCAATTGGGAGCTTGTTCACATCGCCAGAGCTCCTCACATCAGCATCCCTGTTGGTGATTCAACAGTTTCGTGGTCCCTTGTCTTCTTTTTCCACATCTGCAACGGTTTTGCCTGAGGAGGTTAAGGAGTAA 2139 51.43 MLDTLANLGLLFFLFLVGLELDPKSLRHTGKAAMGIAVAGITLPFLLGIGTSYVLRSTISQGVHAPPFLIFMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDVAAWIFLALAIALSGTGSSPLVSLWVFLFGFAFVLFCFFTLPPIFRWMSSRCSDGEPISELYICATLSIVLAAGFFTDLIGIHALFGAFVVGVLVPKDGPLAGALVEKVEGLVSGLFLPLYFVSSGLKTNIATIKGAQSWGLLVLVVFTACFGKVLGTIAVALFCKMPLQESIALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAILVLMAIITTFITTPIVMAVYKPAKRKSKSEYINRTIEREDPNSELRILACFHSVTNIPSVLNLIEASRGAEGKEWVGRRVCVYAMHLMELTERSSAIFMVHRARKNQLPFWNKGGKADSDQIVVAFEDFGQLSRVSIRPMTAISPLSSIHEDVCNSAERKRAAIIILPFHKHQRFDGCLETTRGDFQWVNQKVLEQPPCSVGILVDRGFGGGSHISASNVSSTITIFFFGGRDDREALAYGRRMAEHPGITLNVIRFLPSPDMVVESIVVDINKYDTNDVSAGTDERVLSELKMKKTEEKSIKYEERVVSNSCDAIDVMREFGRCHLILVGRMPEGRVVESFHLKSVECPELGPIGSLFTSPELLTSASLLVIQQFRGPLSSFSTSATVLPEEVKE 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3822779 3825239 + Carg14110-RA Car04g00657 146082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00657 712 Pfam Sodium/hydrogen exchanger family 2 331 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00657 Car-Chr4:3822779 Car16g00507 Car-Chr16:3242592 0 dispersed
Car04g00657 Car-Chr4:3822779 Car04g00658 Car-Chr4:3826180 0 tandem
Car16g00506 Car-Chr16:3230834 Car04g00657 Car-Chr4:3822779 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00657 - - csv:101203169 1120.15