Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00667 ATGGTAATGGATGGTGACATTCATAATTCACATGAAATGGCAAGTTCTAGTACTGTCAATTACCAAAGCTCTGATGCTGCTGAAATTGATTGGGTTGGGATTTTTGGTGGTTCCTCTGATGTGAGTTTGGAAATGGAGAAGGGCAGTGGAGTTAGTGAGGGTGCAATAATGGCCATGGGGGACTGTAACTACCAGAATGAGAGTCATGTTCATGTTCATGGAGGGAAGAACAAAGGGAAAATGGCGATGGGAAAAAGAGGTGCAATTCCTAGGGTTGCTTTTCAGACAAGGAGCGCTGAGGATGTTCTTGATGATGGGTATCGATGGAGGAAATATGGTCAGAAGGCTGTCAAACATAGCACTCATCCTAGGAGCTATTACCGATGTACGCATCATACATGCAACGTTAAGAAACAAATTCAACGGCATTCCAAGGATCCAACCATAGTGGTGACAACATATGAAGGGATTCATAACCATCCATCTGAAAAATTAATGGAGACTCTAACCCCTCTTCTCAAGCAATTGCAGTTCCTTTCTGGCATTTAG 549 42.99 MVMDGDIHNSHEMASSSTVNYQSSDAAEIDWVGIFGGSSDVSLEMEKGSGVSEGAIMAMGDCNYQNESHVHVHGGKNKGKMAMGKRGAIPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLSGI 182
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 3885633 3886575 - Carg14120-RA Car04g00667 146092
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car04g00667 182 Pfam WRKY DNA -binding domain 104 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g00667 182 ProSiteProfiles WRKY domain profile. 98 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00667 Car-Chr4:3885633 Car06g01414 Car-Chr6:10118646 1.11E-37 dispersed
Car04g00667 Car-Chr4:3885633 Car14g00663 Car-Chr14:3662835 6.76E-39 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3285 PF03106 WRKY 9.60E-25 CL0274 Car TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00667 - - cpep:111803929 360.918