Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g00667 | ATGGTAATGGATGGTGACATTCATAATTCACATGAAATGGCAAGTTCTAGTACTGTCAATTACCAAAGCTCTGATGCTGCTGAAATTGATTGGGTTGGGATTTTTGGTGGTTCCTCTGATGTGAGTTTGGAAATGGAGAAGGGCAGTGGAGTTAGTGAGGGTGCAATAATGGCCATGGGGGACTGTAACTACCAGAATGAGAGTCATGTTCATGTTCATGGAGGGAAGAACAAAGGGAAAATGGCGATGGGAAAAAGAGGTGCAATTCCTAGGGTTGCTTTTCAGACAAGGAGCGCTGAGGATGTTCTTGATGATGGGTATCGATGGAGGAAATATGGTCAGAAGGCTGTCAAACATAGCACTCATCCTAGGAGCTATTACCGATGTACGCATCATACATGCAACGTTAAGAAACAAATTCAACGGCATTCCAAGGATCCAACCATAGTGGTGACAACATATGAAGGGATTCATAACCATCCATCTGAAAAATTAATGGAGACTCTAACCCCTCTTCTCAAGCAATTGCAGTTCCTTTCTGGCATTTAG | 549 | 42.99 | MVMDGDIHNSHEMASSSTVNYQSSDAAEIDWVGIFGGSSDVSLEMEKGSGVSEGAIMAMGDCNYQNESHVHVHGGKNKGKMAMGKRGAIPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLSGI | 182 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3885633 | 3886575 | - | Carg14120-RA | Car04g00667 | 146092 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g00667 | 182 | Pfam | WRKY DNA -binding domain | 104 | 161 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car04g00667 | 182 | ProSiteProfiles | WRKY domain profile. | 98 | 163 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g00667 | Car-Chr4:3885633 | Car06g01414 | Car-Chr6:10118646 | 1.11E-37 | dispersed | |
Car04g00667 | Car-Chr4:3885633 | Car14g00663 | Car-Chr14:3662835 | 6.76E-39 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
3285 | PF03106 | WRKY | 9.60E-25 | CL0274 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g00667 | - | - | cpep:111803929 | 360.918 |