Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00683 ATGCAGCACTACAGCAAGAGAATGGAACACTATAAGCTACACCTTACATTATTTGTAGAAGAAAGAGCACATGTTTCGAGAGAAGTTGTGTTGGACTCCAACGCGATTGTGGGAAAATCTAAAACCCGTTGTTGGATCTATGCCCACGCAAAGCAACACGCTGAAAAGTACTTCCCGCTTGATTCTTCATCCAACGACAAGGGTCTTCTCTTGAACTTCGAAGACCGCTGTGGAAAATCGTGGCGGTTCCGTTACTCTTACTGGACCAGCAGCCAGAGCTACGTCATGACTAAAGGCTGGAGCCGCTTTGTTAAAGAGAAGCGCCTCGATGCTGGTGATATCGTCTCCTTTCAACGAGGCCTTGGTCATCTTGGTAAAGATCGGTTTTTTATTGATTGGCGCCGCCGCCCACCTCATGCCCCGCTTGACACACCTATTACTTTTCACCACAACCACCACCTCCACGGCGGTGGAGCCGCCGGGGTTGCCCAAATTCCTCACCATTTTCACCTTCACCAGTGGACTCCAGTTGCCACACCCTTATCTTTACCCAGGGACCACCTCCTCCACTTGCCGCAGAATAATAGTAATCATAATAATCTTACCCTATTTCATAATCATAATTTTAATCTCTATAATCATCATTATCTTAACCCTCCTCCCATCCGAGACGGCGGTGGTTCGCCATCGCTTTTGTACCATTTAAGATCTGCACCGCCACCGCCGCCCGTGGCGGTGGGCGGTGGTGGCGGTGGAATTGGGAAAGGTGCTGCTTCTTCTAAGACATTGAGACTTTTTGGTGTCAACATGGAATGTGCAGTGTCTGAAGATCAATCCGATGATGAATGTGACATAACAACCTCGACTACGACAATGTCGCCTCAATTCCGCGTTTACGATGGAATGCCGATGTCGATACCGATACCTATGCCGAACAGTAACAACAAGCTGACGACCGACTTTTTCAATAAAGGGAAGTCCGATGGCTGTCTCTACTTGGTTGGACAAATGGCAAAGCCCATGCAGGTTTTAGCAGAGAAAAGTTTGAAAGAGATGGCTTTTAACAGTTTTGGATATGGCAGTGGAAGCAAATGCTTTCTTTTTCTGGTGATTAAATGCTTCATTTCTGTTGACAATCACAGTCTCACAAACAAGTTTGGTTTTGTTTATAGGTTTTGA 1179 46.56 MQHYSKRMEHYKLHLTLFVEERAHVSREVVLDSNAIVGKSKTRCWIYAHAKQHAEKYFPLDSSSNDKGLLLNFEDRCGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLGHLGKDRFFIDWRRRPPHAPLDTPITFHHNHHLHGGGAAGVAQIPHHFHLHQWTPVATPLSLPRDHLLHLPQNNSNHNNLTLFHNHNFNLYNHHYLNPPPIRDGGGSPSLLYHLRSAPPPPPVAVGGGGGGIGKGAASSKTLRLFGVNMECAVSEDQSDDECDITTSTTTMSPQFRVYDGMPMSIPIPMPNSNNKLTTDFFNKGKSDGCLYLVGQMAKPMQVLAEKSLKEMAFNSFGYGSGSKCFLFLVIKCFISVDNHSLTNKFGFVYRF 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3966772 3969739 - Carg14136-RA Car04g00683 146108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00683 392 ProSiteProfiles B3 DNA-binding domain profile. 71 137 IPR003340 GO:0003677
Car04g00683 392 Pfam B3 DNA binding domain 51 136 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00683 Car-Chr4:3966772 Car15g01205 Car-Chr15:9362991 1.89E-48 dispersed
Car16g00537 Car-Chr16:3397351 Car04g00683 Car-Chr4:3966772 1.90E-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3287 PF02362 B3 3.40E-19 CL0405 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00683 - - cmax:111480823 469.544