Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00690 ATGAGAACACTTTGTGACTCTTGTGAAAGCGCTGCCGCTATCGTCTTTTGTGCTGCTGACGAAGCCGCCCTTTGCCGCTCTTGTGATGAAAAGGTCCATCTGTGCAATAAACTAGCAAGTCGACATGTAAGAGTTGGCCTTGCAAGTCCCAGTGATGTCCCCCGCTGCGATATATGCGAGAATGCACCTGCTTTCTTTTACTGTGAGATAGATGGAAGTTCCCTTTGTTTGCAATGTGACATGGTCGTTCATGTTGGAGGGAAAAGGACACATAAGAGATACCTTTTGCTAAGGCAGAGGTTTGAGTTTCCAGGAGATAAACCTATAAACCTTGATGAGCCGTCTCCACATTCCAAGGTTCCCAATAATGTCGGTAGAGGGCATAACCAGACACTGCAGCATAAAGTCGCCGTGGAAGACAACCAGCGAAATCATCACCGACTATCGCCTGTTCGGGAGGCTAATGATGACGGTCATGCAGAGACTGATACGAAAATGATCGATTTGAATATGAAGCCTCAAAGGGTCCATGGGCAGGCTGCTAATAATCAGGTTCAACTGCTTTTCCTTATCTCTTCCTCCATAGTGTCAACTGTTTGTTTCTAG 606 46.37 MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKVPNNVGRGHNQTLQHKVAVEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVHGQAANNQVQLLFLISSSIVSTVCF 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4019555 4021525 + Carg14143-RA Car04g00690 146115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00690 201 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Car04g00690 201 Pfam B-box zinc finger 52 92 IPR000315 GO:0008270
Car04g00690 201 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Car04g00690 201 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00690 Car-Chr4:4019555 Car07g00389 Car-Chr7:1970360 3.08E-55 dispersed
Car16g00643 Car-Chr16:4091604 Car04g00690 Car-Chr4:4019555 6.85E-127 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3288 PF00643 zf-B_box 6.90E-07 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00690 - - csv:101208899 361.688