Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00719 ATGAGAGTTCCTGTTTCCAATCACCAATTACCCTCTTCTTCTCCAAATCCCAAACTCAATTCCTCTCCCTCCGCCATCGCCATCGCCACCCCCACTCCCACCCCCACCTCCACCCCCAATATTACCAACCCCTCTTACGAACCCACCTCCGTCCTCGACCTCCGCCGCAGCCCCAGCCCTGTGGCGCCTGACCCACACACCCTCTCCTCCGCTCCACTCCTCCCCACTGACGATCGTCCCAACGTCAACAACAACAACAACAACAACAACCCTTCTCTGGACTGGGATGAACAGGCCCTCCACAACCTCGACTGGGACTCCATCATGGGAGATTTGGGCTTACACGATGACTCCAACTCTGCTCCCAAAAACCCAAACCCAAACCCCAATCCCAATCCCAATCCCAATCCCAATCCCAATCCCAACAACAATAATCATGTTCCTCAATTCCCTGATTTCCTCCACTCCCACCCCTTCGATCATCAAACCCATCTTGTTTCCCCTGATTTCTTCCTCTCTGAACCCCCCTATTCCAACCACACCCCCACCTTCAATTCCTTCGATTTGGCGGCTCCCAATTCCAACAACTTCTCCTGCGAATTCCTTGAAGACATAGTCCGCACCGCTGATTGTTTCGATTCCAATGACTTCCAACTCGCCCACGTCATATTGGAGCGCCTCAATCAACGCCTTCAATCCTCCACCGGAAAGCCCCTTCAGCGGGCCGCCTTCTTCTTCAAAGAGGCTCTTCAATCTCTCCTCTCCGCCTCCAACCGCCACAATCGCCTCTCCTCCTGGCCCGAAATTGTTCATACAATCAGGGCTTACAAGGTCTTCTCTGCAATTTCTCCAATTCCCATGTTCTCCCACTTCACTACTAATCAGGCGCTTCTTGAAGCTCTTAACGGTTCGTCTTTCATTCATATTGTTGATTTTGATATTGGGTTTGGAGGGCAGTACGCATCTTTCATGAAGGAGATTGCAGAGAAGGCAGAGTCCAGGAAGATGATTCCGCCGGTGCTTCGGATAACGGCGGTGGTGCCGGAGGAATTTGCGATTGAGAGTAGGTTGATTAGGGAGAATCTGTGTCAGTTCGCTCAGGATCTGAAGATTCGGTTTCATATAGATCTGGTGCCGCTTCGGACCTTCGAGACGTTGTCGTTCAAATCGGTGAAGTTCATGGAAGGGGAGAAGGCCGCGATTTTATTAACGCCCGCGATCTTCCGCCGTCTTGGGAGTATAAACAGTATAGGGTCTTTTCTCTCCGACGTGCGACGGGTGTCGCCCTGCGTCGTCGTGTTCGTTGACGGTGAAGGATGGTCGGACTCCGGCGCGGCGTCGTTCAAGAGGAATTTGGTAGATAGCCTGGAGTTCTACGCCATGATGCTAGAGTCGCTGGACGCAGCGGTGGCTGGCGGGGACTGGGTGCGGAGGATAGAGACGTTTGTGTTCCGGCCGAAGATATTGGCTGCGGTGGAAGGAGCAGGGAGAATGGCAGCGCCGCCGTGGAGGGAGGTATTCCACGGCGCCGGGATGAGGCCAGTGGCGCTGAGCCAGTTTGCAGATTTTCAGGCAGAGTGCTTACTTGGAAAAGTACAGGTTCAAGGGTTCCAAGTAGGAAAACGGCATGCTGAGCTGGTGCTGTGCTGGCACGAGAGGCCTCTGGTTGCCACGTCGGCGTGGAGGTGTTAA 1692 53.84 MRVPVSNHQLPSSSPNPKLNSSPSAIAIATPTPTPTSTPNITNPSYEPTSVLDLRRSPSPVAPDPHTLSSAPLLPTDDRPNVNNNNNNNNPSLDWDEQALHNLDWDSIMGDLGLHDDSNSAPKNPNPNPNPNPNPNPNPNPNNNNHVPQFPDFLHSHPFDHQTHLVSPDFFLSEPPYSNHTPTFNSFDLAAPNSNNFSCEFLEDIVRTADCFDSNDFQLAHVILERLNQRLQSSTGKPLQRAAFFFKEALQSLLSASNRHNRLSSWPEIVHTIRAYKVFSAISPIPMFSHFTTNQALLEALNGSSFIHIVDFDIGFGGQYASFMKEIAEKAESRKMIPPVLRITAVVPEEFAIESRLIRENLCQFAQDLKIRFHIDLVPLRTFETLSFKSVKFMEGEKAAILLTPAIFRRLGSINSIGSFLSDVRRVSPCVVVFVDGEGWSDSGAASFKRNLVDSLEFYAMMLESLDAAVAGGDWVRRIETFVFRPKILAAVEGAGRMAAPPWREVFHGAGMRPVALSQFADFQAECLLGKVQVQGFQVGKRHAELVLCWHERPLVATSAWRC 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4165840 4167531 - Carg14173-RA Car04g00719 146144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00719 563 MobiDBLite consensus disorder prediction 74 95 - -
Car04g00719 563 MobiDBLite consensus disorder prediction 1 52 - -
Car04g00719 563 MobiDBLite consensus disorder prediction 1 95 - -
Car04g00719 563 MobiDBLite consensus disorder prediction 124 144 - -
Car04g00719 563 MobiDBLite consensus disorder prediction 111 158 - -
Car04g00719 563 ProSiteProfiles GRAS family profile. 192 562 IPR005202 -
Car04g00719 563 Pfam GRAS domain family 204 562 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00719 Car-Chr4:4165840 Car06g00693 Car-Chr6:4205860 1.32E-70 dispersed
Car16g00682 Car-Chr16:4333471 Car04g00719 Car-Chr4:4165840 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3295 PF03514 GRAS 8.10E-90 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00719 - - cpep:111811752 1015.76