Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00723 ATGTCGTACTATAGTGGAGATAATGCGAATGGACCTAAAGGTGGTAACTATTACAACGGTTCACAAAAACCAAATTGGCACAACAACAACGCAGGGGGGGGTCCGGGCGTGAACGGGTGGCCGCCCATGAGTAGTGAGAACATGACCACAAGCGGTAGTTTTACAGGGCCTCCTCTTCCTCCGCCATCGCCATCCCTTGCGTTCGGGTTCAGCAAGAGCACGTTCACGTACGACGAGCTTGCAGCAGCAACAGGAGGGTTCGCGCACGGCAACTTACTTGGGCAGGGGGGGTTCGGATACGTGCACAAGGGGGTGTTGCCCAACGGGAAAGAGGTGGCGGTGAAGAGCCTCAAGGTGGGAAGCGGGCAGGGGGAGAGAGAGTTCATGGCTGAGGTTGAGATTATTAGTAGAGTCCACCATCGGCATTTGGTGTCCTTGGTTGGCTTTTGCATTGCCGGGGGACAGAGAATGTTGGTCTATGAGTTTGTTCCTAACAACACCTTGGAGCATCACCTTCATGGTAAAGACCTCCCTGTAATGGATTGGCCAACCAGGCTTCGTATTGCCATAGGTTCTGCCAAGGGTCTTGCTTACCTTCACGAAGATTGTCATCCAAAAATTATTCATAGAGATATCAAGTCCGCTAATATTCTAATTGATGCCAACTTCGAAGCAATGGTGGCCGATTTTGGATTGGCTAAGTTGTCTTCCGATACTAACACCCATGTCTCCACTAGGGTTATGGGTACATTTGGGTATTTAGCACCCGAATATGCATCAAGTGGGAAGCTAACAGAGAAGTCTGACGTGTTCTCATTTGGTGTAATGTTATTGGAACTCATTACTGGAAAACGACCGGTTGATCCTCATCATGTTATGGAGGATAGCTTAGTAGATTGGGCACGAGCGATTATTAGCGGGGAAATGGGAGAAGATGTATACGAAGTGCTGGTGGATAAGCGATTAGGAAAGGAGTTCAATACTCAGGAGATGGGGCGCATGGTATCATGTGCTGCAGCCTCCATCCGTCACTCCGCTAGAAAACGCCCCAAAATGAGCCAAGTAGTACGAGCCCTGGAAGGGGATTATTCATTGGACGACCTAAACGATGGGATAAGACCAGGTCAAAGCTCAATTTACAGTGTGGCAGGGTCGGACTATGATTCAAATGCGTACCAAGCCGACATGTCGAGATTCAGGAAACTAGCTTTGTCAGACGACAGCAGTGAGCTCGCAACTTCTAGCAATGACTCACGAGAGATCAACCATCCCGGGACCCAAAGGCCTCTCTTTTGA 1296 49.46 MSYYSGDNANGPKGGNYYNGSQKPNWHNNNAGGGPGVNGWPPMSSENMTTSGSFTGPPLPPPSPSLAFGFSKSTFTYDELAAATGGFAHGNLLGQGGFGYVHKGVLPNGKEVAVKSLKVGSGQGEREFMAEVEIISRVHHRHLVSLVGFCIAGGQRMLVYEFVPNNTLEHHLHGKDLPVMDWPTRLRIAIGSAKGLAYLHEDCHPKIIHRDIKSANILIDANFEAMVADFGLAKLSSDTNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDPHHVMEDSLVDWARAIISGEMGEDVYEVLVDKRLGKEFNTQEMGRMVSCAAASIRHSARKRPKMSQVVRALEGDYSLDDLNDGIRPGQSSIYSVAGSDYDSNAYQADMSRFRKLALSDDSSELATSSNDSREINHPGTQRPLF 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4191548 4193327 + Carg14177-RA Car04g00723 146148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00723 431 MobiDBLite consensus disorder prediction 1 32 - -
Car04g00723 431 MobiDBLite consensus disorder prediction 1 60 - -
Car04g00723 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Car04g00723 431 Pfam Protein tyrosine and serine/threonine kinase 90 359 IPR001245 GO:0004672|GO:0006468
Car04g00723 431 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Car04g00723 431 MobiDBLite consensus disorder prediction 410 431 - -
Car04g00723 431 ProSiteProfiles Protein kinase domain profile. 87 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00723 Car-Chr4:4191548 Car18g00729 Car-Chr18:8428061 1.62E-150 dispersed
Car11g00490 Car-Chr11:2666520 Car04g00723 Car-Chr4:4191548 3.03E-62 dispersed
Car04g00723 Car-Chr4:4191548 Car10g00573 Car-Chr10:2897136 6.74E-176 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88781 PF07714 PK_Tyr_Ser-Thr 1.50E-47 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00723 - - cmos:111447691 848.58