Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00727 ATGGCGTATATGTGCGCGGACAGTGGCAATCTAATGGCAATTGCCCAACAAGTCATCAAGCAGAAACAACAGCAGGAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTTTGTCCGCTTACCCCCTTTTCGCTTCTTCCTTGGACTACTACCAATTCTTCTCCAACAATGGCTTCTTCTTCTTCTTCTCCTAATTTATCCTTTGGGGTTTCTGGTTCTGCCTTCGCTGACCCCTTCCAGGTCGCCGGAGATGCGGATTCTGCTGAGCCGGCTTTTCATTTTCCCAATTTGGAGCATCCATCTGCTGGGTTTAGGTTCTTCCCTAACTTCGGCGGTGGGGAGTTCGACTCTGATGAGTGGATGGATAGTTTGGTCGGCGGTGGAGATTCGACGGATAGCTCTACTCTGCCGTCTGGTTGTGATGCTTATGCCGAGTATGGTCTCTTTGGTGTGGATCTCTTTAATGGCTCTCCGAGTCGACTCGTTGTCGCTTGCTCTCCGCGGTCTGATTTTAACCGAGCTGTTCTACCGGAAAGTTCGTGCAACAGGAGTACCGTTCCGCCGCCGCCGTGGAGTTCTCCTCCGCCATCAATAAAGGATGCTAGAGTAGCCAATCCACCGGCGGAGAAGCTGCAGACGAACGACGTTGTAGAAGCCTCGTCGAGCGCGCCTGAAGAGGTGTTGCCGTCGCCGCCACCGCCGCTTCTTAAAGTCTTGTTGGATTGTGCGCGGCTCTGTGATTCCGAGCCCGACAGAGCCGTAAAAACTCTCGATCGGATCGGTAAATCGTTGCTAGAACATGGAGATCCGATTGAGCGAGTGGCGTTTTACTTCGGCGAAGCTCTTCGGAACAGATTATCCCCGGCGGCGAGGAACAATTTCATGGATTCAATTGAGACCGATGCTAATTCCGAAGATTTCTTGCTCTCGTACAAAGCTCTGAACGACGCTTGTCCTTACTCCAAGTTCGCACATCTCACGGCGAACCAAGCAATTCTGGAAGCTACACAGAGAGCCAGTAAAATTCACATTGTCGACTTCGGAATCGTTCAGGGCGTTCAATGGGCGGCGCTTCTGCAAGCTTTGACCACGCGAGCCACCGGAAAGCCTATCAAAGTTCGTATCTCCGGAATACCTGCACCATCGCTCGGGGAGTCTCCAGCGGCATCGCTGTACGCCACCGGCAATAGACTCTCCGAGTTCGCAAAGCTTCTGGAACTGAATTTCGAGTTTGAACCGATTCTAACGCCGATTGAGGATCTGAACAAATCGAGCTTCAGCATCCAATCGGACGAGGTATTGGCGGTGAATTTCATGCTTCAATTGTACGGTCTCCTCGACGAGGTTCCGGTTGGTGTTCATAATGCTCTTCGATTAGCGAAATCGCTAACCCCTAAAATTGTGACTCTCGGCGAGTACGAGGCGAGTTTGAACCGGACTGGATTCTACAATCGCTTCAAAAACGCATTGAAATACTACTCCGCCATTTTCGAATCGCTAGAGCCAAACCTGCCTCGAGACTCGCCGGAAAGGCTCCAATTAGAGAAACTGTTGATCGGTCGTCGAATCGCCGGCGTGATTGGGACGGAAGAAGAATCAGGAAGCAAAAGAAGAGTACGCATGGAAGACAAAGAAGAATGGAAGAATTTGATGGAGAGCTCCGGATTCGAACCTGTAGCACTCAGCCATTACGCCATTAGTCAGGCCAAAATACTTCTATGGAACTACAATTACAATTCTCTCTACTCTCTGATCGAATCGGCACCGGAATTTCTTTCTCTCGCATGGAACGACGTACCTCTCTTAACTGTATCTTCCTGGCGTTGA 1824 50.82 MAYMCADSGNLMAIAQQVIKQKQQQEQQQQQQQQQLCPLTPFSLLPWTTTNSSPTMASSSSSPNLSFGVSGSAFADPFQVAGDADSAEPAFHFPNLEHPSAGFRFFPNFGGGEFDSDEWMDSLVGGGDSTDSSTLPSGCDAYAEYGLFGVDLFNGSPSRLVVACSPRSDFNRAVLPESSCNRSTVPPPPWSSPPPSIKDARVANPPAEKLQTNDVVEASSSAPEEVLPSPPPPLLKVLLDCARLCDSEPDRAVKTLDRIGKSLLEHGDPIERVAFYFGEALRNRLSPAARNNFMDSIETDANSEDFLLSYKALNDACPYSKFAHLTANQAILEATQRASKIHIVDFGIVQGVQWAALLQALTTRATGKPIKVRISGIPAPSLGESPAASLYATGNRLSEFAKLLELNFEFEPILTPIEDLNKSSFSIQSDEVLAVNFMLQLYGLLDEVPVGVHNALRLAKSLTPKIVTLGEYEASLNRTGFYNRFKNALKYYSAIFESLEPNLPRDSPERLQLEKLLIGRRIAGVIGTEEESGSKRRVRMEDKEEWKNLMESSGFEPVALSHYAISQAKILLWNYNYNSLYSLIESAPEFLSLAWNDVPLLTVSSWR 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4221289 4223112 + Carg14181-RA Car04g00727 146152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00727 607 ProSiteProfiles GRAS family profile. 225 607 IPR005202 -
Car04g00727 607 Coils Coil 12 35 - -
Car04g00727 607 Pfam GRAS domain family 235 607 IPR005202 -
Car04g00727 607 MobiDBLite consensus disorder prediction 177 201 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00690 Car-Chr3:6063461 Car04g00727 Car-Chr4:4221289 0 dispersed
Car04g00727 Car-Chr4:4221289 Car07g00433 Car-Chr7:2192215 0 dispersed
Car16g00690 Car-Chr16:4383700 Car04g00727 Car-Chr4:4221289 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3298 PF03514 GRAS 2.20E-106 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00727 - - cmax:111479082 1072.38