Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00733 ATGAACGGCCACAAACGAAGCACCACCCCCGCCACCGCCACCAACAGCAGTCCCGTCGGCAGCCCCACCTCTGGCAACATCTCCGACAGCTCCACGAAAGAACAAGACCGTTTCCTTCCGATCGCAAACGTGAGCCGAATAATGAAAAAATCCCTTCCGCCGAACGCGAAAATCTCGAAAGAGGCGAAAGAGACCGTGCAAGAATGCGTGTCGGAGTTCATCAGCTTCATCACCGGTGAGGCCTCGGACAAGTGCCAAAGGGAAAAACGGAAGACGATCAACGGCGACGATTTGCTCTGGGCCATGACCACTCTGGGATTCGAAAATTATGTCACCACTTTGAAGACTTACCTCAACAAATATAGAGAAACAGAGGAGGAGAAGCATTCTTTGGCCAGACAGGACGATCACTCCCCGTCTCCTGCAAAATCCACGGCGGCGGTCTGTCCAGCCGAACCGATTATTGGTGGGAAATCGGCCAATTCCGTGTTGGATTTTCAGCATTTAAATTCTGGGTTTTATTCACTCGGGGCTCATAATCATAATCACAACCATCATCAAGGAAATCCAAAGAGTTACCATATAATCGACGGCGTTGGATTTGGGGAAAATTTAAGGGGTTTCAATTTGAGTGCAGTCCATGAAAATGAAGGAAATCGAGGTCGAGCTATGGCGGCTCATCTTCAACAGAGCTCTGGTTGGTGA 705 49.79 MNGHKRSTTPATATNSSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPPNAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVTTLKTYLNKYRETEEEKHSLARQDDHSPSPAKSTAAVCPAEPIIGGKSANSVLDFQHLNSGFYSLGAHNHNHNHHQGNPKSYHIIDGVGFGENLRGFNLSAVHENEGNRGRAMAAHLQQSSGW 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4256422 4257126 - Carg14187-RA Car04g00733 146158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00733 234 ProSitePatterns NF-YB/HAP3 subunit signature. 69 85 IPR003956 GO:0005634|GO:0006355|GO:0043565
Car04g00733 234 MobiDBLite consensus disorder prediction 1 38 - -
Car04g00733 234 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 38 102 IPR003958 -
Car04g00733 234 Coils Coil 114 134 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00733 Car-Chr4:4256422 Car04g01334 Car-Chr4:7730799 2.89E-20 dispersed
Car04g00733 Car-Chr4:4256422 Car06g00298 Car-Chr6:1664127 6.13E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3299 PF00808 CBFD_NFYB_HMF 6.10E-27 CL0012 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00733 K08065 - csv:101214273 350.517