Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00736 ATGGGATTGTACGAACCTGTCAACAAGCTTGGAATGTGGGGGAACACTTTTAGAAGCAATGCCAATTTAGATGTACCATCATCAACTCTCGTTATGGAAGTTGATACCAAACTCGAGAATCAGTCAGATGATGCTTCACTTGGTTTATTGGGAGATCCTCACATTTATGATCAAGAAGATACTAAACGCATGGATAAGATTCAAAGACGGCTCGCCCAAAATCGGGAAGCAGCCCGCAAAAGTCGCATACGAAAGAAGGCCTATATTAAGCAACTGGAAACGAGCCGTTTGAGACTTATTCGATTAGAGCAAGAGCTTGAAAAAGCAAGGCAACAAGATCTGTTTGCTGGATCTCGATTTGATCATTATCAGATGGGCTTATCTGGAACCACAAATTCAGTCATCTCTGCATTTGAATCAGAGTACGAGCAATGGGTAGAAGAGCAGAACAAGCAGATTTGTGATCTAAGGAATGTTGTGCATGCTGATATCACTGATATTGAGCTTCGAATACTTGTAGAAAATGCAATGAGACACTACTTCAAATTTTTTCACATGAAAGCCAAAGCTGCAAAAACCGATGTTTTTTACATTATGTCAGGCATGTGGAAAACTTCAGCCGAAAGACTTTTCTTATGGATAGGAGGAATTCGCCCTTCAGAACTCCTCAAGGTCTTGATACCTCAACTGGAGACACTGACTGATCAACAAATTTCGGAAACTAGTAGCCTTAGGAAATCATGTCTACAAGCAGAAGATGCTTTAAGACAAGGTATGGAAAAACTACAACAAAACCTATTTGAGAGCATAGTGGCTAGTCAGCTCGATGAAGGAAGTTATCCCCTACAGATGACCGCTGCAATCGAAAGATTAGAAGCACTCATTAGCTTTGTGAATCAGGTAACATTTAATCTCAAGTTCATGAACTGTGTTATTTTAACATTCTCTTTGGTCATCTTAACCTTCCATGGCCCAAGTCCAAGCCCTGATGATATCTACCTCTTAATGTCTCCTAAAGTTGGCCTTAGGGCAGCTTTGGCTTCCTAG 1047 40.78 MGLYEPVNKLGMWGNTFRSNANLDVPSSTLVMEVDTKLENQSDDASLGLLGDPHIYDQEDTKRMDKIQRRLAQNREAARKSRIRKKAYIKQLETSRLRLIRLEQELEKARQQDLFAGSRFDHYQMGLSGTTNSVISAFESEYEQWVEEQNKQICDLRNVVHADITDIELRILVENAMRHYFKFFHMKAKAAKTDVFYIMSGMWKTSAERLFLWIGGIRPSELLKVLIPQLETLTDQQISETSSLRKSCLQAEDALRQGMEKLQQNLFESIVASQLDEGSYPLQMTAAIERLEALISFVNQVTFNLKFMNCVILTFSLVILTFHGPSPSPDDIYLLMSPKVGLRAALAS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4269395 4274895 - Carg14190-RA Car04g00736 146161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00736 348 Pfam bZIP transcription factor 63 94 IPR004827 GO:0003700|GO:0006355
Car04g00736 348 Pfam Seed dormancy control 152 227 IPR025422 GO:0006351|GO:0043565
Car04g00736 348 ProSiteProfiles DOG1 domain profile. 135 348 IPR025422 GO:0006351|GO:0043565
Car04g00736 348 Coils Coil 85 112 - -
Car04g00736 348 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 69 84 IPR004827 GO:0003700|GO:0006355
Car04g00736 348 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 64 108 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00736 Car-Chr4:4269395 Car15g00042 Car-Chr15:338564 9.27E-93 dispersed
Car12g00121 Car-Chr12:640069 Car04g00736 Car-Chr4:4269395 8.57E-75 wgd
Car16g00700 Car-Chr16:4450520 Car04g00736 Car-Chr4:4269395 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3300 PF14144 DOG1 3.80E-27 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00736 K14431 - csv:116401613 496.893