Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00754 ATGATGGTGGAGTTCCATGGAGAAATCCCAGAAGACTCTCACGATGGAGACGAAGAACAGGAAGAGGAAATTAGCTACGATGATCTTAAGAAACGAATGTGGAAAGACAGACAGAGGTTGAAGAAGATGAAGGAGAATCGTGATCATGAAGAGTTTGAATGGGCGGCTAGAGAAGAAGCTTCTCGCCGGAAGAAAATGTCCAGAGCTCAAGATTCGATTCTCAAGTACATGGATAAGATAATGGAGTCTTGTAAGGCACAAGGGTTTGTTTATGGGATCGTGCCGGAAAAGGGTAAACCGATCACCGGCTCTTCTGAGAGCCTCCGTGAGTGGTGGCAGGACAAGGTTCGGTTCGAACAGGATGCTCCACTGAACATCGCGAATTTACTTCCGAGAGCGATCGAAGAAGCGGGGCTCGATACCAAATCGTTTCTGCACCTACTCCAAGAATTGCAGGACACGACTTTAGGGTCGATTCTGTCGGCTCTGATGCAGCACTGTATTCCGCCGCAGAGGAAATTCCCATTGGACAAAGGTCTGGCGCCGCCTTGGTGGCCGACGGGAAAGGAGCTTTGGTGGGGCGAACAAGGCGTGGCCGGTGGGCAGGGCGTTCCACCATATAAAAAGCCTCATGATCTCAAGAAGTCCTGGAAAGTCAGTGTCCTTGCGGCGGTGATTAAACACATGTCTCTTGATTTGGACAACATGAGGAAATTGGTTCGACAATCGAAGAATTTACAGGCGAAAATGACGGCGAAAGAGACGATTACTTGGACTAAGGTCGTGAATCAAGAAGAAGCTCTCTTGCAATTGACCAAAAACAGCCTCAAAATAACATCCGACGAAGAAGATCAAGAACAACACCACCAAAACAGAGGACCCGAAAACAGGGCAGAACAAGGCACCGGCGGGATTATTACGAAACGGAAGTGCGAATTCGAACGAGAAGCCACAGCTGATTCAGCGGTGTATGCTTGCCAGAACGAATGGTGCCCACAGAGCGAGGCGCCAAAGGGGTTCGCCGACAAGAACGCGAGAACAGAGCACGAGACGCAGTGCGTTTACAGAGCCGACGGCGTGGGGCAATTTTCTAACGAGCAGTCGATCGACACGCATTTGATGAGCGTGGTGGAGTGGATGAACTGGGAGCTGTCGAGGGCAGAGCCGAGCAGCGGCGAGTCGAGGATCGATGACGGCGGATATGGGTCAGGTAGCAGCACAGTGGATGGCAGTGGGTATTGGAAGGGCAGCATCGGAGAGGTAGGGGTGGATGGGTCGGGTAGCAGCACGGTGGAGGATTATGGCAGTGGGTATTGGAAGGGCGGGATTGGAGAGGCAGCGGTGGATGGGTCGGGTAGCAGCACGGTGGATGATTATGGGAGTGGGTTTTGGAAGGGCGGCATCGGAGAGGCAGCAGTGGACGAGGCGTTTGAGATGCATAGAGAGAGTATGGATTTGAATGCGAGTCCGGCGGACGATTTGCAATGCCACCAACAAGATGCAACTTCGATTTGGGATTTGAGATATGAATGGAGTGAAGAGTGA 1545 51.78 MMVEFHGEIPEDSHDGDEEQEEEISYDDLKKRMWKDRQRLKKMKENRDHEEFEWAAREEASRRKKMSRAQDSILKYMDKIMESCKAQGFVYGIVPEKGKPITGSSESLREWWQDKVRFEQDAPLNIANLLPRAIEEAGLDTKSFLHLLQELQDTTLGSILSALMQHCIPPQRKFPLDKGLAPPWWPTGKELWWGEQGVAGGQGVPPYKKPHDLKKSWKVSVLAAVIKHMSLDLDNMRKLVRQSKNLQAKMTAKETITWTKVVNQEEALLQLTKNSLKITSDEEDQEQHHQNRGPENRAEQGTGGIITKRKCEFEREATADSAVYACQNEWCPQSEAPKGFADKNARTEHETQCVYRADGVGQFSNEQSIDTHLMSVVEWMNWELSRAEPSSGESRIDDGGYGSGSSTVDGSGYWKGSIGEVGVDGSGSSTVEDYGSGYWKGGIGEAAVDGSGSSTVDDYGSGFWKGGIGEAAVDEAFEMHRESMDLNASPADDLQCHQQDATSIWDLRYEWSEE 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4366440 4367984 - Carg14208-RA Car04g00754 146179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00754 514 Coils Coil 26 46 - -
Car04g00754 514 MobiDBLite consensus disorder prediction 279 304 - -
Car04g00754 514 MobiDBLite consensus disorder prediction 1 25 - -
Car04g00754 514 Pfam Ethylene insensitive 3 27 266 IPR006957 GO:0005634
Car04g00754 514 MobiDBLite consensus disorder prediction 279 295 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00754 Car-Chr4:4366440 Car10g00877 Car-Chr10:5251306 6.08E-111 dispersed
Car16g00716 Car-Chr16:4581370 Car04g00754 Car-Chr4:4366440 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3301 PF04873 EIN3 2.50E-106 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00754 K14514 - csv:116406094 675.241