Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00763 ATGAGATATAGCAATGACTCGATTAATCTTTTTTGCTTGGATTTCATGACGTTGCCCATGAAAATGATGTTAGTGAAGATGGGAAAACTCTATCTTACAGCTCTAGTTCTGGCCCTCTTTCATTATATTGCACTGTCTGATTTTCAAGGTCAGGCACTCATTGAATTAAAGAAAGCATTGAATGCAACAGGGAGTCAGCTCACAAGTTGGAACGCAGATCATATCAATCCATGTAGTAGTTGGTCCAATATTATATGTAACGGAAACAATGTGACTAAGATATTATTGTCAACAATGGGATTGACTGGAACCCTGTCTCCGAGTATTGTTGTTCTAAAATCTCTTTCAACTCTGAACTTGAAGGGAAATTACATAACTGGAGAGATACCAGAGGATTTTGGAAACCTGACAAATTTGGTCACCTTGGACCTGGAAAATAACAGCCTAACTGGTCGAATACCATCATCCCTTGGTAATCTTAAGAAACTACAGTTCCTAACTCTGAGTCAAAATCATCTCGCTGGGACTATTCCTGAATCATTTTCGACCCTTCCTAGCTTGATCAATCTTTTTCTTGATTCAAATAATCTCAATGGCCAAATTCCGGAGCAGTTATTTCAAGTTTCAAAATTCAACTTTTCGGGAAATAGGTTGAATTGTGGCAAAAAATTTCACCGTTCCTGTGCTTCAGATAGTACAAACTCAGGTGCTTCCAATAAGTCAAAGGTTGGCCTTATAGCTGGACTTATTGCTGGGCTAATGCTTGCTCTTCTTTTGGTCGGAGTATTGTTTTTCTTGTGCAAGTATAGATATAAAGGCAACAAGGGCGAAGTCTTTGTAGATGTTCCAGGTGAAATTGATCGAAGAATTGCATTTGGTCAGCTGAAAAGATTTCCATGGAGGGAATTGCAGCTAGCTACAGAAGACTTCAGTGACAAAAATGTTATAGGACAAGGAGGCTTTGGAAGGGTTTACAAAGGGGTGCTTACTGATGGCACCAAGGTTGCAGTGAAACAGTCAACTAATTATGAAAGCCTTGGGGGAGATGCTGCTTTTCTACAGGAAGTTGAGATGATTAGTGTAGCTGTTCATAGAAATCTATTGCGGCTGATTGGGTTCTGTACAACTGAGACCGAACGCTTATTGGTATATCCCTATATGCAGAACTTGAGTGTTGCCTACCATCTTCGAGGTAAACAGTTTTTTGGTTGTTTTGGATCTGAAATTTGCAAAATTTTCTCTAAAATATGGGCAGAG 1257 39.3 MRYSNDSINLFCLDFMTLPMKMMLVKMGKLYLTALVLALFHYIALSDFQGQALIELKKALNATGSQLTSWNADHINPCSSWSNIICNGNNVTKILLSTMGLTGTLSPSIVVLKSLSTLNLKGNYITGEIPEDFGNLTNLVTLDLENNSLTGRIPSSLGNLKKLQFLTLSQNHLAGTIPESFSTLPSLINLFLDSNNLNGQIPEQLFQVSKFNFSGNRLNCGKKFHRSCASDSTNSGASNKSKVGLIAGLIAGLMLALLLVGVLFFLCKYRYKGNKGEVFVDVPGEIDRRIAFGQLKRFPWRELQLATEDFSDKNVIGQGGFGRVYKGVLTDGTKVAVKQSTNYESLGGDAAFLQEVEMISVAVHRNLLRLIGFCTTETERLLVYPYMQNLSVAYHLRGKQFFGCFGSEICKIFSKIWAE 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4404331 4410074 - Carg14217-RA Car04g00763 146188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00763 419 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Car04g00763 419 ProSiteProfiles Protein kinase domain profile. 310 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00763 419 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Car04g00763 419 Pfam Leucine rich repeat N-terminal domain 49 87 IPR013210 -
Car04g00763 419 Pfam Protein kinase domain 311 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00763 Car-Chr4:4404331 Car20g00882 Car-Chr20:8660234 1.33E-98 dispersed
Car04g00763 Car-Chr4:4404331 Car04g00765 Car-Chr4:4418557 2.68E-85 proximal
Car04g00763 Car-Chr4:4404331 Car04g00764 Car-Chr4:4413218 5.39E-85 tandem
Car16g00732 Car-Chr16:4641025 Car04g00763 Car-Chr4:4404331 7.21E-94 transposed
Car16g00731 Car-Chr16:4638191 Car04g00763 Car-Chr4:4404331 1.35E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88783 PF00069 Pkinase 9.10E-13 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00763 - - cmax:111479289 725.317