Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00796 ATGCCATTTTTGAACTTTCCACCATCCTCTGTCTTTCTTCTTTTCACTCTCTCCTTCTTCCACTTCTTCGCTGTGGGTGTCTTCTCCAACGTCGACTACGATATTCTGATTCGTGTCAAGAACACCCATCTCGACGATCCCGATGGAGCTTTGAAGGATTGGGTTCCCAACCAAGCTCACACCCCCTGTTCTTGGACTGGCATCACCTGCGATTCCACTAACTTTTCTGTTCTTGCCATCAATTTGACCACTTCCAACATCGCCGGCGGATTTCCCTACGATTTCTGCCGGATTCCCACCCTTCAAAACCTTTCTATCACAGTCACCAACATCAATGGAACTTTACTCTCCCCTTCCTTCTCTCTCTGTTCTCGCCTCCAACTTCTCAATCTTTCCTCTAATCTACTTGTCGGTAGGCTGCCCCAGTTTTCCCCTCTTTTCACACAGCTTCAAATTCTCGATCTCTCCTCCAATAATTTCACCGGCGATGTTCCTCTCAGTTTCGGCCAGTTGCCGGCGCTCAGAGTGCTTCGTTTGACGATGAATTTGCTCGACGGCCCTGTCCCCTCTGTTCTGGGAAATCTCAGTCAGTTAACCGAAATGGCCATCGCTTATAATCCCTTCAAACCGAGTCCCTTACCGTCCGAGTACGGAAACCTGTTAAAACTCGAAAATATGTTTATAAGCACAGCAAATCTCACCGGACCCATTCCTGGTTCCATCGGAAAACTTGCTATGCTTACCAATCTTGATTTAACTTTCAATTCGATATCTGGCCCGCTCCCGGATTCAATCGGCGGACTCAGGAGCATAAAGAGTATACAACTCTACAATAACCGAATCTCCGGTGAATTGCCAGAGAGCATCGGTAATTGGACTTCTCTGTCACGTCTCGACCTCTCGCAGAATAGTCTCACCGGAAAGTTACCGGATAAATTTGCTGCGATCCCTCTAGAAATTCTGCATCTCAATGACAATTTCCTGGAAGGGGAGTTTCCGGAGAGTTTAGCTTCGAGCCCACATCTTACAGATTTGAAACTGTTCAACAATAGCTTTTCTGGGACACTTCCCCAAAATTTGGGTCTCAACTCTCCCTTTACTGAGATTGATTTCTCTTCCAACCATTTCGAAGGTAATATTCCGAAATTTCTCTGCCAACAAAACCGCCTTCAGAAATTTATTTTATTCAGCAACAGCTTCTCTGGGAATTTCCCAGAATCGTACGGCGCTTGTGATTCTCTTGTATATGTCAGAATCGAGGACAATCAACTTTCCGGCGAGGTACCGGACTCGTTCTGGAAACTCCCTAAGCTTAATAGCATACAGATGTCGGATAATCAATTTCAGGGCTCCATTCCGCCGGCGATAAGTCTCGCTCGCGATCTCCAAGTGTTGTTGATTTCCGGTAACAACTTCTCCGGCCAGTTGCCAGAGGAGATTTGCAAATTGAAAGAGCTAGTTCGGTTTGACATCAGCAGGAACAAATTCTCCGGTGGAGTTCCTTCTTGTATAACAGAGTTGCAGAAACTTCAAAAGCTCGACATGCAAGAAAACCAGTTCGCCGGCGAAATTCCCAAGTTGGTTCAGTTCTGGAAAGAACTAACCGAGCTAAATCTGTCCCATAATCAATTTACCGGCAAGATTCCGCCTCAGCTTGGCGATTTACCGGTCCTAACGTACTTGGATCTCTCTTCAAATTTACTCTCCGGCGAAATCCCCGAGGAATTGACAAAGCTGAAACCGGACCAATTCAATTTATCAAACAACAAATTGACCGGAAAAGTTCCATCCGGCCTCGTCAACGAACAGTTCGTCGGTAGTTTACTGGGTAATCCGGGTCTCTGTAGCTCGGATTTGAAGCCACTGAACCGGTGCTCAAAATCCAAACCCTCAAGCTTCTATGTTGTGGTGATTCTCTCAGTTCTAGCTTTCGTTCTCATCGGGTCGCTCATTTGGGTAATCAAATTCAAGATGAATCTGTTGGGCAAATCCAAATCTCCATGGACGGCGACCAAGTTCCAAAGGGTCGGGTTCGACGAAGAAGATGTAATTCCTCATCTAACCAAAGGGAATATAATCGGGTCGGGCGGTTCGGGTACCGTATTCAAAGTGAATCTGAAAACAGGTCAGACCGTAGCCGCCAAAAGTCTGTGGAGAGGCCACAACCAATCGGATATTGAATCGGTTTTCCAATCGGAAGTTGAGACGTTGGGTCGGATCCGGCATGCCAATATTGTGAAGTTGATATTCAGTTGCAGTAATGGTGAAGGAAGTAGAATCCTTGTGTACGAGTACATGGAGAATGGAAGCTTAGGAGATGTTCTACACGAGAACAAATCCGAAGCTTTGTCAGATTGGTCGAAAAGATTGAACATCGCCATGGGAGCGGCCCAGGGATTAGCTTATCTGCACCATGACTGCGTCCCTCCAATAATCCATCGCGACGTGAAGAGCAACAACATTCTGTTGGACGCTGAATTTTGCCCTCGAGTGGCTGATTTTGGTCTGGCAAAGACGCTGGAACGCCAGACAGAGGGAAACGATGCTGGTGTCATGTCTCGCATCGCTGGCTCCTACGGCTATATTGCCCCCGAATATGGATATACTATGAAGGTAACCGAGAAGAGCGACGTGTATAGCTTTGGAGTAGTTTTGATGGAGTTAGTGACGGGGAAGCGACCAAACGACCCGAGCTTTGGGGAGAACAAAGATATCGTGAAATGGGTAACGGAGGCTGCTTTATCAGAGGTTGAGGAGAAAGGGTTGAGCTTGGATGAGATAATTGATGAAAAGTTGGATCCAAGAACATGTGAAGTAGAGGAGATAGCAAAGATTTTGGATGTGGCTGTGCTTTGTACATCTGCTTTGCCCATTGACAGACCTTCCATGAGAAAAGTAGTTGAGATGATAAGAGACACCAAACTCCCTCCTTCTAAGTCATGA 2943 46.45 MPFLNFPPSSVFLLFTLSFFHFFAVGVFSNVDYDILIRVKNTHLDDPDGALKDWVPNQAHTPCSWTGITCDSTNFSVLAINLTTSNIAGGFPYDFCRIPTLQNLSITVTNINGTLLSPSFSLCSRLQLLNLSSNLLVGRLPQFSPLFTQLQILDLSSNNFTGDVPLSFGQLPALRVLRLTMNLLDGPVPSVLGNLSQLTEMAIAYNPFKPSPLPSEYGNLLKLENMFISTANLTGPIPGSIGKLAMLTNLDLTFNSISGPLPDSIGGLRSIKSIQLYNNRISGELPESIGNWTSLSRLDLSQNSLTGKLPDKFAAIPLEILHLNDNFLEGEFPESLASSPHLTDLKLFNNSFSGTLPQNLGLNSPFTEIDFSSNHFEGNIPKFLCQQNRLQKFILFSNSFSGNFPESYGACDSLVYVRIEDNQLSGEVPDSFWKLPKLNSIQMSDNQFQGSIPPAISLARDLQVLLISGNNFSGQLPEEICKLKELVRFDISRNKFSGGVPSCITELQKLQKLDMQENQFAGEIPKLVQFWKELTELNLSHNQFTGKIPPQLGDLPVLTYLDLSSNLLSGEIPEELTKLKPDQFNLSNNKLTGKVPSGLVNEQFVGSLLGNPGLCSSDLKPLNRCSKSKPSSFYVVVILSVLAFVLIGSLIWVIKFKMNLLGKSKSPWTATKFQRVGFDEEDVIPHLTKGNIIGSGGSGTVFKVNLKTGQTVAAKSLWRGHNQSDIESVFQSEVETLGRIRHANIVKLIFSCSNGEGSRILVYEYMENGSLGDVLHENKSEALSDWSKRLNIAMGAAQGLAYLHHDCVPPIIHRDVKSNNILLDAEFCPRVADFGLAKTLERQTEGNDAGVMSRIAGSYGYIAPEYGYTMKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVKWVTEAALSEVEEKGLSLDEIIDEKLDPRTCEVEEIAKILDVAVLCTSALPIDRPSMRKVVEMIRDTKLPPSKS 980
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4595252 4598454 - Carg14250-RA Car04g00796 146221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00796 980 Pfam Protein kinase domain 689 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00796 980 ProSitePatterns Protein kinases ATP-binding region signature. 693 715 IPR017441 GO:0005524
Car04g00796 980 ProSiteProfiles Protein kinase domain profile. 687 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00796 980 Pfam Leucine Rich Repeat 534 552 IPR001611 GO:0005515
Car04g00796 980 Pfam Leucine rich repeat N-terminal domain 30 71 IPR013210 -
Car04g00796 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Car04g00796 980 Pfam Leucine rich repeat 247 305 IPR001611 GO:0005515
Car04g00796 980 Pfam Leucine rich repeat 149 207 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00796 Car-Chr4:4595252 Car18g00370 Car-Chr18:2281232 0 dispersed
Car04g00796 Car-Chr4:4595252 Car13g00509 Car-Chr13:7177936 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88785 PF00069 Pkinase 9.80E-45 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00796 - - cmax:111486690 1852.03