Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00812 ATGGCCCTTACCAAGGTGAAAGAGCCAGTTTGTGTGACCGGAGCCAATGGGTTCATCGGATCTTGGGTCATCGGTACGCTGTTGGAAGCCGGTTACACTACCATTCATGCCTCGATCTTCCCCGGCTCCGATGCTTCCCATTTGTTCAATCTCCAGGCCTCTGCTAACCCTAATGCTACCCTTCGGATTTTCGAAGTGAACGTAATGGACGGCGAGGCTGTGGCCAGGGCTGTGGAAGGCTGCAAGGGCGTATTCCACATTGCGTCACCCTGCACGCTGGAGGATCCTATTGATCCACAGAAAGAATTGGTGGAGCCGGCAGTGAAAGGCACTCTTAATGTTCTTGAGGCTGCGAAGAAACTTGGGGTACGGCGCGTTGTTCTTACTTCTTCTATTTCGGCTCTTGTTCCCAACCCTGGCTGGCCATCCGACAAGCCATTTGATGAATCGTCGTGGACAGACCTGGAGTACTGCAAATCGCGAAAGAAATGGTATCCAGTGTCAAAAACATTAGCAGAGAAAGCAGCATGGGAGTTTGAAGAGAAGCATGGATTGGATGTAGTTTCCATCCTGCCTGCCACATGTCTTGGTCCTCTTCTGCAACCAAATTTGAATGCAAGCTGTGCTGTGTTGCAGCAGTTGCTCCAAGGATCAAGGGACAGTCAGGAGTATCACTGGTTGGGTGCTGTGCATGTCAAAGATATTGCAAAAGCACAAGTATTGTTGTTCGAGTCTCCCACTGCTTCTGGTAGATATCTCTGCACCAATGGTATCTATCAATTTGCCGATTTTGCCGACGAAGTCTCGAAAATCTACCCTGAATTTCCTGTTCACAGATTTGTGGGAGAAACACAACCCCACTTGGTTTCCTGCAAAGATGCAGCCAAGAGGTTGATTGATCTGGGACTTATCTTCACCCCTCTTGAAGTTGCAATTCGAGATACGGTTGAGAGCCTTAGAAGCAAAGGTTTTCTGAAGCAGTGA 984 48.98 MALTKVKEPVCVTGANGFIGSWVIGTLLEAGYTTIHASIFPGSDASHLFNLQASANPNATLRIFEVNVMDGEAVARAVEGCKGVFHIASPCTLEDPIDPQKELVEPAVKGTLNVLEAAKKLGVRRVVLTSSISALVPNPGWPSDKPFDESSWTDLEYCKSRKKWYPVSKTLAEKAAWEFEEKHGLDVVSILPATCLGPLLQPNLNASCAVLQQLLQGSRDSQEYHWLGAVHVKDIAKAQVLLFESPTASGRYLCTNGIYQFADFADEVSKIYPEFPVHRFVGETQPHLVSCKDAAKRLIDLGLIFTPLEVAIRDTVESLRSKGFLKQ 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4725390 4728526 - Carg25861-RA Car04g00812 146237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00812 327 Pfam NAD dependent epimerase/dehydratase family 10 248 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00812 Car-Chr4:4725390 Car13g00020 Car-Chr13:212491 1.08E-110 dispersed
Car04g00812 Car-Chr4:4725390 Car14g00956 Car-Chr14:5815604 4.93E-78 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00812 - - cmo:103493282 587.8