Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00826 ATGGTTCATACTGGTGCGTGCATTGCCTCATTACTGGGACAAGGAGGCTCTCGCAAATACCGCTTGACCTGGAAGTGGCTGAGATACTTCAAAAATGATAGGGACAGGCGGGATTTGATCACGTGTGGTGCAGCAGCTGGTGTGGCAGCTGCCTTTCGAGCTCCAGTTGGTGGCGTTCTCTTTGCACTTGAAGAAGCAGCTTCATGGTGGAGGAGTGCTCTTCTCTGGAGGACCTTTTTCACTACTGCTGTAGTAGCCGTTGTCTTGAGGGGTTTTATGGAATTTTGCCGAGGGGGGCAATGTGGGTTATTTGGTGAAGGAGGTCTCATCATGTTTAATATTCATACAGAAAACTCCACTTATGGCACTCCAGATCTTATTGCAATTGTTTTACTTGGAGTTATTGGTGGTGTGTTTGGAAGCCTGTACAATTACCTCGTGGATAAGGTCCTTCGAACCTACAGCATCATAAATGAGAGAGGTCCTGGATCGAAAGTCATTCTTGTTGTTAGCATTTCCCTATTGACAACATGTATCTCATTTGGTCTTCCTTGGCTCTCACAATGTTTACCTTGCCCACCTCACTTGGAAGACGAATGCCCAACTGTTGGTCGCTCAGGAAACTACAAGAATTTCCAATGCCCGCCTGGCCAATATAATGATCTTGCGTCGCTATTTTTCAATACCAATGATGATGTCATCCGCAACCTGTTCACATCTGCTACTGACAAGCAATTTCAGCTCTCCTCACTTTTTATCTTCTTTACTTCTATCTATTTTCTTGGCATTATTACTTATGGCATTGCCGTGCCCTCGGGGCTCTTCATTCCTGTAATACTGGCAGGGGCCTCTTATGGTCGCATTGTAGGGAGATTATTTGGTTCAGTTGCCACTCTTGATGTCAGTCTCTATGCCCTTCTCGGAGCTGCATCCTTCCTTGGTGGCACTATGAGAATGACTGTTTCTCTATGTGTCATACTCCTTGAGCTTACTAATAACCTTTTGATGCTCCCACTACTTATGTTGGTTCTTCTAATTTCAAAGTCAGTGGCAGATATTTTTAATAAAGGTGTCTATGATCAGATTGTGAAGATGAAGGGACTACCTTTTATGGAAGCCCATGCAGAACCATTTATGAGGCAATTGGTCGCTGGTGGTGTGGCTTCTGGTCCCTTAATTACGTTCTCTGGGATTGAGAAGGTCGATAACATTATCCATGCCTTGAAAATGACGAACCACAATGGGTTTCCTGTAATTGATGAGCCACCTTTCTCAGATAGTTCAGAGCTTTGTGGGCTTGTTTTGAGGTCTCATCTACTTGTTTTGCTTAAAGAGAAAAAATTTACAAAGAAAAAGACGTCAATTAGATCAGAAATTTTGAGGAGCTTCAAAGCATATGATTTTGCAAAACCTGGTTCTGGCAAAGGAGTGAAACTGGAAGATTTGGACATCAACGAGGAGGAGATGGAAATGTTTGTTGATCTTCATCCCATCACAAATACGTCGCCTTACACAGTGGTAGAAACAATGTCTCTGGCTAAAGCAGCGATTCTCTTTCATGCTCTTGGCTTGAGGCACTTACTGGTGGTTCCGAAGACTCCCGGGAGGCCTCCTATTGCTGGAATTCTTACAAGGCATGATTTCATGCCGGAATATATTCTGGGACTTTACCCGTATCTCAACCCTCATTAG 1692 43.97 MVHTGACIASLLGQGGSRKYRLTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFMEFCRGGQCGLFGEGGLIMFNIHTENSTYGTPDLIAIVLLGVIGGVFGSLYNYLVDKVLRTYSIINERGPGSKVILVVSISLLTTCISFGLPWLSQCLPCPPHLEDECPTVGRSGNYKNFQCPPGQYNDLASLFFNTNDDVIRNLFTSATDKQFQLSSLFIFFTSIYFLGIITYGIAVPSGLFIPVILAGASYGRIVGRLFGSVATLDVSLYALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLLMLVLLISKSVADIFNKGVYDQIVKMKGLPFMEAHAEPFMRQLVAGGVASGPLITFSGIEKVDNIIHALKMTNHNGFPVIDEPPFSDSSELCGLVLRSHLLVLLKEKKFTKKKTSIRSEILRSFKAYDFAKPGSGKGVKLEDLDINEEEMEMFVDLHPITNTSPYTVVETMSLAKAAILFHALGLRHLLVVPKTPGRPPIAGILTRHDFMPEYILGLYPYLNPH 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4828587 4833908 - Carg25876-RA Car04g00826 146251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00826 563 Pfam CBS domain 500 548 IPR000644 -
Car04g00826 563 Pfam Voltage gated chloride channel 1 352 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Car04g00826 563 ProSiteProfiles CBS domain profile. 498 559 IPR000644 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00826 Car-Chr4:4828587 Car12g01158 Car-Chr12:11153212 0 dispersed
Car04g02849 Car-Chr4:21612634 Car04g00826 Car-Chr4:4828587 1.08E-121 transposed
Car17g00223 Car-Chr17:1376376 Car04g00826 Car-Chr4:4828587 2.96E-20 transposed
Car16g00792 Car-Chr16:5197673 Car04g00826 Car-Chr4:4828587 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00826 K05016 - csv:101209987 970.304