Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00833 ATGGCTCTGGTTCTGTACTCCTGGAACACTAACAAAAATGCTTACAAAGCTCTTATAGTTGCAGAATACAATGGTGTCAAGGTTGACCTTGCCCCAGGTTTTACCATGGGCGTAACCAATAAGTCTCCTGAGTTTCTCAAAATGAATCCTATTGGGAAGGTTCCTGTGCTTGAAACACCCGAAGGTGGTATCTTTGAGAGCAATGCCATAGCTCGCTATGTTGCTCGCTTGAAGGACTGTGGTTTGTTTGGTTCTTCTCCAATTGAATATGGACATGTTGAACAATGGATTGACTTTGCCACACTTGAAATTGATGTTCATATTGGTGCTTTAGCAGGGCCTAGATATGGATATCGTGCTTACCATGCTGCTGTTGAAGAAGCTGCAAACGCTGCCCTAAAACGCTCTTTTGCTGCTCTGAACTCTTACCTTGCTTCAAACACATACCTTGTTGGACATTCTGTGACACTTGCTGATATCATTGTAACATGCAATTTGTATTGGGGAATCTCTTTTCTGTTGACTAAAAGCTTTACTTCTGAGTTCCCTCACGTCGAGAGGTACTTCTGGACAATGGTCAATCAACCAAATTTCAAGAAGATTATTGGTGAGTTTAAGCAGACAGAAACTGTTCCACCAGTGAAAACACCGGGAGAGGCTGCAGCAGCTGCCAAGCCAAAGCCTGAGCCTAAGAAGGAAGAGAAGCCCAAAGCAGCAGCACCTGCAGAGGAAGAGGATGCACCAAAGCCCAAGGCCAAAAATCCTCTTGACCTCCTTCCTCCCAGTAAGATGATTTTGGATGAGTGGAAACGTCTGTACTCGAACACAAAAACTAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGACATGTACGATCCTGAAGGGTACTCCCTTTGGTTCTGTGATTACAAGTACAATGACGAGAACACAGTTTCCTTTGTGACTTTGAACAAAGTCAGCGGATTTCTCCAGAGAATGGATCTTGCTCGTAAATATGCCTTTGGAAAGATGCTTGTGATTGGATCAGAAGCACCCTTCAAGGTGAAGGGGCTATGGCTTTTCCGTGGGCAAGAAATCCCACAATTTGTTATGGACGAGTGCTATGACATGGAGCTGTACGAGTGGAAGAAGGTTGATATCTCCGATGAAGCCCAGAAGGAGAGAGTGAACCAAATGATTGAAGATCAGGAACCATTTGAGGGAGAGGCTCTCTTGGATGCCAAATGCTTCAAGTGA 1239 44.55 MALVLYSWNTNKNAYKALIVAEYNGVKVDLAPGFTMGVTNKSPEFLKMNPIGKVPVLETPEGGIFESNAIARYVARLKDCGLFGSSPIEYGHVEQWIDFATLEIDVHIGALAGPRYGYRAYHAAVEEAANAALKRSFAALNSYLASNTYLVGHSVTLADIIVTCNLYWGISFLLTKSFTSEFPHVERYFWTMVNQPNFKKIIGEFKQTETVPPVKTPGEAAAAAKPKPEPKKEEKPKAAAPAEEEDAPKPKAKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLVIGSEAPFKVKGLWLFRGQEIPQFVMDECYDMELYEWKKVDISDEAQKERVNQMIEDQEPFEGEALLDAKCFK 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4864965 4868146 + Carg00008-RA Car04g00833 146258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00833 412 Gene3D - 80 213 - -
Car04g00833 412 SFLD Main (cytGST) 3 192 - -
Car04g00833 412 SUPERFAMILY Thioredoxin-like 2 77 IPR036249 -
Car04g00833 412 PANTHER - 1 412 - -
Car04g00833 412 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Car04g00833 412 SUPERFAMILY GST C-terminal domain-like 73 213 IPR036282 -
Car04g00833 412 Pfam Glutathione S-transferase, C-terminal domain 122 196 IPR004046 -
Car04g00833 412 Gene3D Glutaredoxin 1 74 - -
Car04g00833 412 CDD GST_C_EF1Bgamma_like 89 211 - -
Car04g00833 412 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 252 412 IPR036433 GO:0003746|GO:0006414
Car04g00833 412 Pfam Elongation factor 1 gamma, conserved domain 251 359 IPR001662 GO:0003746|GO:0006414
Car04g00833 412 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 412 IPR044628 GO:0004364
Car04g00833 412 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Car04g00833 412 MobiDBLite consensus disorder prediction 225 252 - -
Car04g00833 412 MobiDBLite consensus disorder prediction 211 254 - -
Car04g00833 412 SFLD Glutathione Transferase (cytosolic) 3 192 IPR040079 -
Car04g00833 412 CDD GST_N_EF1Bgamma 3 77 - -
Car04g00833 412 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 252 412 IPR001662 GO:0003746|GO:0006414
Car04g00833 412 SMART EF1G_2 251 359 IPR001662 GO:0003746|GO:0006414
Car04g00833 412 SUPERFAMILY eEF1-gamma domain 253 412 IPR036433 GO:0003746|GO:0006414
Car04g00833 412 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00833 Car-Chr4:4864965 Car12g00363 Car-Chr12:2329870 8.91E-13 dispersed
Car04g01944 Car-Chr4:12571068 Car04g00833 Car-Chr4:4864965 0 transposed
Car06g00742 Car-Chr6:5037073 Car04g00833 Car-Chr4:4864965 0 transposed
Car16g00797 Car-Chr16:5228476 Car04g00833 Car-Chr4:4864965 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00833 K03233 - csv:101215571 675.241