Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00864 GAGGCAAAAAAGACATTAAATATGCCTACAGTTTGGTTGTCCTTGAAGAAATCTCTGCACTGCAAATCAGGGCCATCCGAAGTTCATGACCCAAAAAGCAGAAGAAATCTAGGCGCCATTTTGACAAGAAAAACAGGGGGAGGAAGATCGGGTTGTTCCAGGTCCATTGCAAATCTCAAAGATGTCATCCATGGCGGCAGCAAGAGGCATTTGGATAAGCCCCCAAGTTGCAGTCCAAGATCCATTGGCAGCAGTGAGTTTCTCAACCCAATAACCCATGAAGTCATTCTCACCAACTCAAGGTGCGAGCTCAAAATCACCGGATTTCACGGCGCTTTCCCACCAGATGTGCCTTCCTCCGCCGATGAACCCCTCACAGATCGTCCCGCCGCCTCCACTTTTGTGGGTACTCTGACACCGGGTACGCCGGGCCCCGGTGGCCACCCCACAATGCATTACTTCAATCCTTCCTTTAGGTCTTCTTCCAGAAAGTTCCCTTTCAGAGAGGGATTTGTAAGCTCTAATAAATCTGGCGGCGGCGGTGGAGCTCGCAGCCTCGGTGGTGGAGGTGGAGGTGGAGGTGGAGTCCATACGAGTAACAGAATCTCATTGGAGACAGAGATTGATGGGAATAGATCTTCTTCTGCGGTCACTTGTCATAAATGTGGAGAGCAGTTCAACAAATGGGATGCTGCTGAAGCTCATCATCTTTCTAAACATGCTGTGACTGAGCTTGTGGAAGGAGATTCATCAAGGAAAATTGTGGAGATCATATGCAGGACAAGCTGGTTAAAGTCTGAGAATCAATCTGGTAGGATTGAAAGAGTACTCAAAGTTCACAATATGCAACGAACGCTAGCCCGGTTTGAGGAGCATCGTGAGACGGTTAAGATCAAAGCCAGCAAGCTCCCGAAGAAGCACCCTCGGTGTCTTGCCGATGGAAACGAGCTGCTGCGATTCTACGGCACGACAGTTGCGTGCTCCCTCGGTTTGAATGGCTCCTCCAGCCTCTGCATATCGGAGAAGTGCTGCGTATGCAGGATCATACGCAATGGATTTTCGGCAAAGACAGAGATGAAAGAAGGGATAGGCGTGTTCACAACGTCGACAAGCGCAAGAGCATTCACCTCGATCGAGGCGTCGGGAGGGGAGGAGGAGGGGGGGATGGTGAGGAAGGCGATGATAGTTTGCAGAGTGATTGCAGGGAGAGTTCACAGGCCATTGGAGAACATACAAGAAATGGCTGGGCAGACAGGGTTTGATTCATTGGCTGGAAAAGTTGGGCTGCATTCAAATATAGAAGAGCTTTATTTGCTGAATCCTAGAGCTTTGCTTCCATGTTTTGTGGTAATTTGCAAAGCATGA 1365 49.45 EAKKTLNMPTVWLSLKKSLHCKSGPSEVHDPKSRRNLGAILTRKTGGGRSGCSRSIANLKDVIHGGSKRHLDKPPSCSPRSIGSSEFLNPITHEVILTNSRCELKITGFHGAFPPDVPSSADEPLTDRPAASTFVGTLTPGTPGPGGHPTMHYFNPSFRSSSRKFPFREGFVSSNKSGGGGGARSLGGGGGGGGGVHTSNRISLETEIDGNRSSSAVTCHKCGEQFNKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQSGRIERVLKVHNMQRTLARFEEHRETVKIKASKLPKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCISEKCCVCRIIRNGFSAKTEMKEGIGVFTTSTSARAFTSIEASGGEEEGGMVRKAMIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLHSNIEELYLLNPRALLPCFVVICKA 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4978981 4980614 - Carg00039-RA Car04g00864 146289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00864 454 MobiDBLite consensus disorder prediction 169 196 - -
Car04g00864 454 ProSitePatterns Zinc finger C2H2 type domain signature. 219 240 IPR013087 -
Car04g00864 454 MobiDBLite consensus disorder prediction 65 84 - -
Car04g00864 454 MobiDBLite consensus disorder prediction 131 155 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00864 Car09g00835 CCT
Car04g00864 Car16g00569 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00864 Car-Chr4:4978981 Car16g00569 Car-Chr16:3597167 0 dispersed
Car16g00829 Car-Chr16:5472356 Car04g00864 Car-Chr4:4978981 0 wgd
Car04g00864 Car-Chr4:4978981 Car09g00835 Car-Chr9:5096028 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3313 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00864 - - cmax:111489735 791.956