Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00880 ATGATCCAAGAGCCTGCCGGCATGCGATTCCCAATGCTCTGCCCCAGAGATTTGATCTCTGTTTCCCTTTTTATTTCTCTTCTTCTTGTTTCCAATTTATCTCCCTGTTCCGCACAAGACTACATCATAGGCGACCCCGGAGCAGCTGGCGGAGCAGGCGGCGGAGCAGTCGGCGGAGATGCTGGCGATGATACCAAGGAGAAGCCGGCGACGGGACCGCCAGAGCACAACAACTGTAATGGCATATACTTGACCTACAATTTCATTTCGCGTGAGAAGGAGCTGCCCCGGTTAAAGAATGCGACGGCTCAGGCTTGGGCCTTCAAATCGGAGGCGACAATTCTGAACTCCGGATTGACTGAGCTCAAGGGCTGGAAGATGTTCATCGGATTTCACCACCACGAGATTCTCGTCTCCGTCGACGGCGCCGTCCTGTTGGATGGCTCCGATTTCCCTGCGGACGTTGGAAAAGGAGTCACTTTGGCTGGGTATCCGATGACCGATCTTAAAACGTCCATTGAAACCGCCGGTGATATTAATCAGATCCAAGTGACGGCTGCGATCACCGGATCACAATTTGGCATCAAGCCCCCTGGTGTTCCAATGCCTAAGACAATTCGCCTCGTTAACGATGGATATAAGTGCCCTGCCCCTCGTCTTCGTGGGAAAAGAACAATGCATGTATGTTGCAAAAAAGATCCGAAGTTCAAGGAGAAAAAAGCACCCAAGGCCAAGAAAATCAAATTTCTGGCTAGGCAAAATGGAGATCTCTCACTAACGTACGATGTGATGCAATCTTTTGGAAACAACTATCTAGCTCAAGTCACAATCGACAACAACAACCCACTGGGGCGCTTGGATCACTGGAACTTAACCTGGGAATGGATGAAAGGAGAGTTCATTCAAAGCATGAGAGGAGCATACACTCATACAAGAGACATAGCTCAATGCGTCTACGGCCCTGCAGGCCAATACTATCAAGATTTCGACTTCACTGGCGTCATGAGTTGCGATAAGAACCCGGTGATGGCCGATCTACCAGCGCAACGGAAGGACGATCCCAAGATTGGAAAGTTGCCATATTGCTGCAGGAATGGAAGCTTGTTGCCTACCATGATGGATGAAAGCAAAGCAAGGTCTATTTTTCAGCTACAAGTCTTCAAGCTTCCACCAGACATGAACCGAACGGCTCTTACTCCACCACAGAAATGGAAAATCTCAGGTATCCTAAATCCGGAATACGAATGTGGTGCTCCGATCCGAGTCGTACCGACCGAGTTTCCAGACCCAAGCGGGCTTCAATCAACGAGCACGGCGATCGCTAGTTGGCAAGTTGTATGCAACATTACAAAGCCAAAAGTGAAGCAATCAAAATGTTGTGTTTCATTCTCAGCATATTATAATGACTCAGTAATTCCTTGCAATACTTGTGCGTGTGGGTGTGAAGACACTGATACTTCTAGTTGCAATCCAAATGCACGCTCAATGCTGCTCCCTCCAGAAGCCCTTTTGGTGCCATTTGATAACAGGACAAAGAAGGCAAGGGCATGGGCTAAAATTAAGCACTACCCAAATCCAAAGACGATGCCTTGTCCTGATAACTGTGGAGTTAGTCTGAATTGGCATATTAACTCCGACTATGCCGATGGATGGACTGCAAGACTCACACTTTTCAACTGGGAAGATTACCCATTTGAGGATTGGTTCACTGCCGTTCAATTGGGTAAGGCCGGCCGGGGTTACGAAAATGTTTACTCCTTCAATGGAACCAAGCTTCCCAACGTTAAAAATACCATCTTTCTCCAAGGCTTGCCTGGCTTGACTTACTTGATGGGAGAGGTGAATGGGACCAATCCCACATCGGATCCGAGAATTCCAGGAAAGCAGCAGTCCGTGATCTCTTTTAAGAAGAAGGGCCTGCGCGACTTGGACATACAACGAGGTGATGGCTTCCCTATTAAAGTGTTTTTCAACGGCGAGGAATGTGCGCTTCCAAGGGCGATTCCCATGCCCAGTTCAGCCTGCCGCTGTACCGACGGTGTCATGCGCCTCGTCTTCATCTTGGCTGTTACTTTGGCGCTTATAACAGATCGCTTCCATTGA 2103 48.69 MIQEPAGMRFPMLCPRDLISVSLFISLLLVSNLSPCSAQDYIIGDPGAAGGAGGGAVGGDAGDDTKEKPATGPPEHNNCNGIYLTYNFISREKELPRLKNATAQAWAFKSEATILNSGLTELKGWKMFIGFHHHEILVSVDGAVLLDGSDFPADVGKGVTLAGYPMTDLKTSIETAGDINQIQVTAAITGSQFGIKPPGVPMPKTIRLVNDGYKCPAPRLRGKRTMHVCCKKDPKFKEKKAPKAKKIKFLARQNGDLSLTYDVMQSFGNNYLAQVTIDNNNPLGRLDHWNLTWEWMKGEFIQSMRGAYTHTRDIAQCVYGPAGQYYQDFDFTGVMSCDKNPVMADLPAQRKDDPKIGKLPYCCRNGSLLPTMMDESKARSIFQLQVFKLPPDMNRTALTPPQKWKISGILNPEYECGAPIRVVPTEFPDPSGLQSTSTAIASWQVVCNITKPKVKQSKCCVSFSAYYNDSVIPCNTCACGCEDTDTSSCNPNARSMLLPPEALLVPFDNRTKKARAWAKIKHYPNPKTMPCPDNCGVSLNWHINSDYADGWTARLTLFNWEDYPFEDWFTAVQLGKAGRGYENVYSFNGTKLPNVKNTIFLQGLPGLTYLMGEVNGTNPTSDPRIPGKQQSVISFKKKGLRDLDIQRGDGFPIKVFFNGEECALPRAIPMPSSACRCTDGVMRLVFILAVTLALITDRFH 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5071120 5073798 + Carg00055-RA Car04g00880 146305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00880 700 MobiDBLite consensus disorder prediction 53 76 - -
Car04g00880 700 Pfam COBRA-like protein 271 450 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00880 Car16g00854 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00880 Car-Chr4:5071120 Car06g01315 Car-Chr6:9408958 0 dispersed
Car16g00854 Car-Chr16:6258208 Car04g00880 Car-Chr4:5071120 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00880 - - cmax:111492051 1379.77