Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00906 ATGGTATTAAGGCATTACCACCATTTTGCTGCAGTTTCTGCACTGAACGTGATGTACAGTAGTTTAAATTCACCATCACAATTGTCTGGTTGGGGTTCAAGTGGGGGTGACCCATGTGGCGACTCTTGGGAAGGGATCCAATGCTCAGGAACATCCGTCACTGAAATACATTTATCAGGCTTTGGACTAAGTGGATCAATGGGTTACCAGCTCTCAAATTTGGTTTCTGTCACCTACTTTGATTTGAGCAAGAACAACCTCAATGGCGATATCCCGTATCAGCTTCCTCCTAATGCCGTTCATGTCGATCTTTCTGAAAACAGCTTCACTGGTAGCGTGCCTTATTCGATTTCTCAAATGGGTGATCTTAATTTTTTAAATCTTGCTCATAATCAGCTTAGTAACCAATTGAGTGACATGTTTGGCAAGCTTCCTAAACTTAAAAGTCTGGATCTCTCATACAACTCAATATCAGGAACCTTACCTCAAAGTTTTAACAAGCTTTCAAGCCTCACCACATTGCACCTTCAAGAGAATCAATTTAAAGGTTCAATTAATGTTCTTGCTGACCTTCCACTTGATGATCTGAACGTCGCAAATAACCAATTCACCGGATGGATTCCTGCGACTCTTGAGGACATTAATAATTTGGAAACTGTAGGAAATTCTTGGTCAACTGGGCCAGCTCCTCCTCCACCACCCGGCACAGCGGCCGCTAACAAAAAATCCAACAAAGACAAGTCGAGCAACAAATCCTCAAGCATCAGCGGCCTGGTCATAGCTGGAATAGCGATGGGGGTTTTGGTATTAATCGCCATTCTCATTGCATTGATCTCAAGAAGGTCTCCTCCTTCCCATTATCTTGATGAAGACACAAACCCACACAGATCCTTCACTCCACTTACATCCCAAGAACTCACCAAAGGTTTGCACAATGGAGATGATAGAAAATCAATAAACTCAGATACCTCTGTTGACATAAAGGCTCTTCAGAATGCTTCGAGTGGGCTTATTAGGCCTCCTCCGCCCTTTGATCCTGTGCAGGCCTTCAGTGATAATCAGTTTGCCAGCCGTCTCAACTCCAGAAGAAGCACTTCTGTTCGTGCCATTTCTTACTCCTTGGTTGATTTGCAAGCTGCTACAGCTAATTTTTCGACTGCTCGCCTTCTTGGTGAGGGCACTATTGGACGTGTCTATAAGGCCAAGTATGGAGATGGAAAGGTCTTAGCTGTGAAGAAGATAGATTCATCAGTTTTTGAAGGAAGAAGAAAAGAAGAATTTTCAGAAGTAGTTGCAATCGTCTCAAAGCTTCGCCACACAAACCTTACAGAAGTGGTTGGTTTTTGTTCAGAACAGGGACATAACATGCTGCTTTACCAATATTTCATGAATGGTTCACTTCATGAGTTTCTACATATGTCTGATGACTTCAGTAAACCACTCACCTGGAATACTCGAGTCAGAATCGCTTTGGGGACAGCCCGAGCTCTTGAGTACCTTCATGAAGTTTGCTCACCGTCTATAATTCACATGAATATCAAGTCCTCGAATATATTGCTCGATACCGATCTCAACCCTCGAATATCAGACTATGGTTTGGCCACTTTTTATAAGAATAGAAGGGAAGTCCCTGGAGTTGGATATGATGCTCCAGAATGCAAAAAGGGTTCAAATTATACAATGAAGAGTGACATTTACAGTGTGGGAGTGGTGATGTTGGAATTGTTGACAGGGCGGATGCCATTTGACTCTTCGAAGGCAAGGGTGGAGCAAAGTCTAGTCCGGTGGGCTACCCCACAGCTGCACGACATAGATGCATTGGACAAAATGGTGGATCCAGCATTGAGAGGGTTATATCCACCAAAATCAGTGTCTAGATTTGCAGATATCATTGCCCTTTGTGTTCAATCAGAGCCTGAATTTCGGCCTCCCTCGTCGGAGGTGGTGCAAGCCTTGGTAACTTTGGTTCAACGATCCAGTATGAATGTGAGAGATGATCTTGGAAGCTCCCGACGAGTGGATGATTATGACTATTAA 2037 43.54 MVLRHYHHFAAVSALNVMYSSLNSPSQLSGWGSSGGDPCGDSWEGIQCSGTSVTEIHLSGFGLSGSMGYQLSNLVSVTYFDLSKNNLNGDIPYQLPPNAVHVDLSENSFTGSVPYSISQMGDLNFLNLAHNQLSNQLSDMFGKLPKLKSLDLSYNSISGTLPQSFNKLSSLTTLHLQENQFKGSINVLADLPLDDLNVANNQFTGWIPATLEDINNLETVGNSWSTGPAPPPPPGTAAANKKSNKDKSSNKSSSISGLVIAGIAMGVLVLIAILIALISRRSPPSHYLDEDTNPHRSFTPLTSQELTKGLHNGDDRKSINSDTSVDIKALQNASSGLIRPPPPFDPVQAFSDNQFASRLNSRRSTSVRAISYSLVDLQAATANFSTARLLGEGTIGRVYKAKYGDGKVLAVKKIDSSVFEGRRKEEFSEVVAIVSKLRHTNLTEVVGFCSEQGHNMLLYQYFMNGSLHEFLHMSDDFSKPLTWNTRVRIALGTARALEYLHEVCSPSIIHMNIKSSNILLDTDLNPRISDYGLATFYKNRREVPGVGYDAPECKKGSNYTMKSDIYSVGVVMLELLTGRMPFDSSKARVEQSLVRWATPQLHDIDALDKMVDPALRGLYPPKSVSRFADIIALCVQSEPEFRPPSSEVVQALVTLVQRSSMNVRDDLGSSRRVDDYDY 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5174426 5179457 - Carg00081-RA Car04g00906 146331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00906 678 Pfam Leucine rich repeat N-terminal domain 12 49 IPR013210 -
Car04g00906 678 ProSiteProfiles Protein kinase domain profile. 384 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00906 678 MobiDBLite consensus disorder prediction 220 252 - -
Car04g00906 678 Pfam Protein kinase domain 385 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00906 678 Pfam Leucine rich repeat 139 181 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00906 Car-Chr4:5174426 Car08g00721 Car-Chr8:4628073 0 dispersed
Car14g01081 Car-Chr14:9513853 Car04g00906 Car-Chr4:5174426 3.15E-38 dispersed
Car15g01289 Car-Chr15:10058747 Car04g00906 Car-Chr4:5174426 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88792 PF00069 Pkinase 3.10E-42 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00906 - - csv:101209107 1071.61