Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00910 ATGAGGACTGGGAACCGAAAGAGGAAGCTAAGGCTAAGCAAGATCTATTCATTTGCTTGTGGAAGAACTTCATTGAAAGATGAAGATCATTCACAAATTGGGATGCTCGGGTTCTCCCGGGTGGTTTTCTGTAATGATCCTGATTGTTTGGAGGCTGGTATGCGTAATTATGTTAACAACTCTATCAGTTCTACAAAGTACACACCCATCACTTTTGTGCCCAAGTCGCTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTTTACTTCTTGATTGCTGGTATATTAGCCTTCACTCCTCTTGCTCCTTATACTGCTGTCAGTGCAATTGTCCCTCTTATTGCAGTCATTATTGCGACAATGGTTAAAGAAGGTGTTGAAGATTGGAGACGAAAAGCACAGGATATTGAGGTGAATAATAGAATGGTTAAAGTTCATCAAGGCAATGGAGTCTTCGATAATACTGAATGGAAAACTTTGAGGGTTGGAGATATAGTGAAGGTTGAAAAGGATCAATACTTTCCAGCCGACCTTCTTTTGATTTCATCCTGCTATGAGGATGGAATCTGTTATGTAGAAACGATGAACCTTGATGGGGAAACAAATTTAAAGGTAAAGCAAGCACTCGATACAACTGCATTTGCACGTGAGGATTCTAACTTTTTTGACTTTAAGGCTACAATCAAATGTGAAGACCCAAATGCAAATCTTTATACCTTTGTTGGGAGTATGGACTTTGAAGATCAACAATATCCACTTTCTCCACAAAATCTTCTCCTGAGAGACTCCAAACTCCGAAACACAGAATATATATATGGGGCTGTTGTCTTTACTGGCCATGATTCAAAGGTTATTCAAAATTCTACTGATCCACCTTCTAAGAGAAGCAAAGTTGAGAAGAAGATGGATAAAATTATATATCTGTTGTTTAGCTGTCTATTCATGCTGGCCTTCATTGGATCTATAGTCTTCGGAGTTATGACTAAAGATGATCTTATAAATGGGAGGACAAAGAGATGGTATCTTAGACCAGATGATTCTACTATTTACTTTGATCCCAAAAATGCACCAGCTGCTGCAATTTTCCACTTTCTGTCAGCACTGATGTTGTATAACTACTTTATCCCTATATCCTTGTATGTGTCTATAGAAGTTGTCAAAGTTCTTCAGAGTATCTTCATCAATCAAGACATTCACATGTATTATGAAGAAGCTGACAAACCAGCACATGCCCGCACCTCCAATTTGAATGAGGAACTTGGTCAAGTTGACACTATACTCTCTGACAAGACCGGAACTTTGACCTGTAACTCAATGGAGTTTATCAAGTGTTCTGTGGCTGGAACAGCTTATGGAAGCGGAGTCACTGAAACTGAGAGAGCTATGGAAAGCAGAAATGGCATGCCAATGCTTTATGGAAATGGCAATGGAAACACCTATAAGCACAATGAGGATGCTACAGATACAACTCCCTCTGTCAAAGGCTTTAATTTTAAGGACAATAGGATTATGAACGGAAACTGGGTTAATGAACCTCATGCAGATGTCATCCAGAAGTTCTTCCGCCTCCTTGCTACTTGTCAAACAGCTATTCCAGATGTTGATGAAAACACAGGCAAGGTTTCATATGAAGCTGAATCGCCAGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAATTGGTTTCGAATTCTTCCAGAGGACACAGACAAGCATATCGATTCGTGAACTCGATCCTAGGTCTGGAGGGAAGGTTGAAAGGTCATATAAGCTTTTAAATGTTCTGGAGTTTAATAGCGCCCGGAAGAGGATGTCTGTTATAATAAGAGATGAAGAAGGGAAAGTACTATTACTATGCAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGAATGCTAGTAAATTTGAAGAGAAAACGAAGGACCATATCAATGAGTGCGCTGATGCAGGGCTAAGGACCTTGGTACTTGCTTATCGTGAACTTGATGAGGAGGAATACAAGTTATTTGATAGGCAATTCTATGAAGCCAAGAATTCAGTTAGTGCAGAGAGGGATTCATTGATTGATAAAGTAACAGATCGCATTGAAAGGGATTTAATTCTTCTTGGTTCCACAGCAGTTGAGGACAAGCTTCAAAATGGAGTCCCTGAATGCATAGACAAACTTGCTCAAGCTGGGATTAAGATCTGGGTTTTGACTGGGGACAAGATGGAGACTGCGGTCAATATTGGTTTTGCCTGCAGTTTGCTTAGACAAGGAATGAAACAGATTATTGTATCTCTGGAAACACCAGAAATTCAGGCCTTAGAAAGGACAGGAGAGAAGGATATGATCAGTAAGGCATCAAAAGAAAGTGTCATCCACAAGATAACTCGGGCAAGGTCTCAGCTCACTGCATCAAGTGGAAGCGCAGAGGCTTATGCATTGATAATTGATGGGAAGTCACTTACTTATGCTCTAGAGGATGATGTGAAGGATGCATTCCTTGAGCTTGCAATTGGATGTGCATCTGTTATTTGCTGTCGCTCATCACCAAAGCAGAAAGCAATGGTCACTCGATTGGTTAAACTTGCAACGGGGAAAACAACATTAGCAATTGGTGATGGCGCAAATGATGTTGGAATGCTTCAGGAAGCAGATATTGGCATTGGAATTAGTGGTGCCGAAGGAATGCAGGCTGTCATGTCGAGTGATATTACAATTGCTCAGTTCAGATATTTGGAGCGTCTACTACTTGTACATGGACATTGGTGCTACAGGAGATTGTCATCAATGATATGCTACTTTTTCTACAAGAATTTTACCTTTGGTTTTACACTTTTCTTATACGAGGCATACACTTCATTCTCTGCACAACCTGCATATAACGATTGGTTTATGTCACTCTACAATGTTGTGTTCTCCGCACTGCCAGTTGTGGCTCTTGGGGTGTTTGACCAGGACGTGTCTGCAAGATATTGCCTTAAGTTTCCTATGTTGTACCAGCAAGGTGTTCAGAATGTCCTCTTCAGCTGGGCCCGGATACTCAGCTGGATGTTTAATGGTTTGTGCAGTGCGTTGATCATTTTCTTTTTCTGCACAAATGGAATGAAGCATCAGGCATTTAACCCCGATGGGAAAACTGTGGGGAGAGATATCCTTGGAGCGACAATGCTGTCATGTGTTGTTTGGGTCGTCAACTTGCAGATGGCACTCTCTGTTAGCTACTTCACCTTGTTACAACATATTTTCATCTGGGCTTCAATCTTTATCTGGTACCTCTTTTTGATGATATATGGAGCCTTCCCTGCCAACATTTCAGGAAATGCATATCGTGTGTTCCTCGAAGCCCTTGCTCCTGCCGGGTCTTATTGGGTTCTGCTGATCTTTGTGGTGATCTCTACTCTCATTCCATTCTTTGTATACTCAGCATTACAGGTGAATTTCTTTCCGATGTACCATGAAAAAATACAGTGGATCAGGCACGATGGTAAGGGTCAGATAGACAATCCTGAGTTTGTCAATATGGTCAGGCAAAGCTCGTTGAAACCAACAACTGTCGGCTTCACTGCTCGTTTGGCAGCCAAAATAAGAAGAGATAATTCATAG 3591 41.24 MRTGNRKRKLRLSKIYSFACGRTSLKDEDHSQIGMLGFSRVVFCNDPDCLEAGMRNYVNNSISSTKYTPITFVPKSLFEQFRRVANFYFLIAGILAFTPLAPYTAVSAIVPLIAVIIATMVKEGVEDWRRKAQDIEVNNRMVKVHQGNGVFDNTEWKTLRVGDIVKVEKDQYFPADLLLISSCYEDGICYVETMNLDGETNLKVKQALDTTAFAREDSNFFDFKATIKCEDPNANLYTFVGSMDFEDQQYPLSPQNLLLRDSKLRNTEYIYGAVVFTGHDSKVIQNSTDPPSKRSKVEKKMDKIIYLLFSCLFMLAFIGSIVFGVMTKDDLINGRTKRWYLRPDDSTIYFDPKNAPAAAIFHFLSALMLYNYFIPISLYVSIEVVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGSGVTETERAMESRNGMPMLYGNGNGNTYKHNEDATDTTPSVKGFNFKDNRIMNGNWVNEPHADVIQKFFRLLATCQTAIPDVDENTGKVSYEAESPDEAAFVIAAREIGFEFFQRTQTSISIRELDPRSGGKVERSYKLLNVLEFNSARKRMSVIIRDEEGKVLLLCKGADSVMFERLAKNASKFEEKTKDHINECADAGLRTLVLAYRELDEEEYKLFDRQFYEAKNSVSAERDSLIDKVTDRIERDLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAVNIGFACSLLRQGMKQIIVSLETPEIQALERTGEKDMISKASKESVIHKITRARSQLTASSGSAEAYALIIDGKSLTYALEDDVKDAFLELAIGCASVICCRSSPKQKAMVTRLVKLATGKTTLAIGDGANDVGMLQEADIGIGISGAEGMQAVMSSDITIAQFRYLERLLLVHGHWCYRRLSSMICYFFYKNFTFGFTLFLYEAYTSFSAQPAYNDWFMSLYNVVFSALPVVALGVFDQDVSARYCLKFPMLYQQGVQNVLFSWARILSWMFNGLCSALIIFFFCTNGMKHQAFNPDGKTVGRDILGATMLSCVVWVVNLQMALSVSYFTLLQHIFIWASIFIWYLFLMIYGAFPANISGNAYRVFLEALAPAGSYWVLLIFVVISTLIPFFVYSALQVNFFPMYHEKIQWIRHDGKGQIDNPEFVNMVRQSSLKPTTVGFTARLAAKIRRDNS 1196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5185579 5192235 - Carg00085-RA Car04g00910 146335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00910 1196 Pfam E1-E2 ATPase 139 384 - -
Car04g00910 1196 Pfam Phospholipid-translocating ATPase N-terminal 42 108 IPR032631 -
Car04g00910 1196 Pfam Cation transport ATPase (P-type) 536 629 - -
Car04g00910 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Car04g00910 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 895 1145 IPR032630 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00910 Car-Chr4:5185579 Car18g00984 Car-Chr18:10348396 0 dispersed
Car15g01283 Car-Chr15:10038789 Car04g00910 Car-Chr4:5185579 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00910 K01530 - csv:101205800 2237.61