Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00919 ATGGCTCCTCAAAGCTTCTACTCCGTCCTTCTTCCCATCTTCTTCTTCCTCCATCTCCATTTCTCCTCCCCAAACCCCACAATTTGTCATTCCAATGACTCCGAGGCCTTGCATGACTTCCATAGCACTTTTAGTTCTCAAATCGATGGATTGCTCACCAACTGTTCGACGAAATGCTGCACTTGCATTGGCATCACTTGTGACTCCTCTGGAAGAGTTGTGAAGATGGAGCTTGATGGGAGGAAGCTCATTGGTCCATTACCAAACTCAATAGCAAGATTGGAGCACCTCAGAGTTCTTAATCTGTCCTCTAATTCCCTCACTGGGTTTATTCCCGTTGCTCTGTTTCAGCTCCCTTACTTGGAAGTTCTTGATCTCAGTTTCAATCAGTTCCTGGGGAGCATCTCTACAGGTACCATAAACCTTCCTTCCCTTCGGGTTCTTAATGTTTCTCATAATTCATTCAATGGTGTTCTTCCTCTTGGGGTTTGTGTCAACTCCTCTAGAATTGAGGTTCTGAATCTTGGTTTCAATAAGTTCATTGGTACGATTCCTTTTCAACTTGCTGAATGTGTTTCCTTGAAGAGACTGCATGTGGAATCAAATTTTATCAGGGGTGGGATACCTGATGAGGTTTCTGGATTGAGAAAATTGACCCATCTTTTTGTTCAGAATAACAAGCTTTCTGGTTTTTTGAATAGTGTTGTTGGGAATCTAACAAGCCTTGTTCAGTTGGATTTGTCATCTAATGAGTTTTTTGGAGAAATTCCTGATGTTTTTTACGACTCTGTGAATTTGAGTTCCCTTGTTGCTGTGTCAAATAGGTTTAGTGGGAAGATACCCAATTCATTGTCAAACTCTCCTTCACTCACTGTCCTAAATTTGAGGAACAATTCAATAGGGGGAACTCTTGATCTTAATTGTTCAGCAATGACAAGCCTGGTTACACTTGACTTGGGGACTAACAGGTTTCATGGATCTATACCTAGCAATCTTCCCTTTTGTACTCAACTGAGTAGCATAAACCTTGCTAGGAACAAGCTCGGCGGTCAGATCCCCGAAAGCTTTAGGAATTTTCAGAGCCTATCATATTTATCACTTACGAACACGAGCATTGTTAATGTTTCGTCTGCGCTTAATGTCTTGCAACATTGTCAGAATTTGAGTACTGTGGTTCTTACCTTTAACTTCCATGGTGAAGTGTTGGGAGATGATCCTATCATGCATTTCAAGAGCCTCCAAGTTTTTATAATTGCTAATTGCGGATTGAAGGGAATGATACCCCAGTGGTTGAGAGGTTCTAACAAGTTGCAGCTGTTGGATTTGTCATGGAACCATCTTGGAGGAAATATTCCATCCTGGTTCGGCCAGTTTCCGTTCTTGTTTTACTTGGATTTATCTAATAATTCATTCACTGGATATATCCCGAAAGAGATGACTGAAATAAAGAGTTTCGTCCACAGATACTTCTCACTTGATGACCCTTCCTCACCGGATTTTACTCTGTTTGTGAAAAAAAATGGAAGTGGATTGCAGTACAATCAATTATCAAGATTTCCTCCCACTTTGAATCTCAGCCTCAACAATCTCAGTGGGCCAATCTGGCCAGAGTTTGGGAATCTTAAGGAGCTTCTAGTTCTTGATCTGAAAAACAACAACTTGTCGGGGTCAATTCCGAGCAGCCTCTCTGGGATGGTTAGCTTAGAGACTCTGGATCTTTCTCACAATAATCTTTCAGGAATAATTCCACCATCACTGCAAAAGCTCAATTTCTTGTCTAAGTTCAGTGTTGCATACAATCATTTACATGGGGTGATTCTTAAAGGAGGCCAGTTTCACACCTTTGGGAAGTCTAGCTTTGAAGGAAACAATTTTTGCGTTCAAGACGTATTATGTGCATCAATTGACCGAGATCCTCTAGTACCATCCCACAAATCAAGAATGGTTATATGGACTATTATATGTATGGTTATCGGTATTGTGTTCGGAATCGTGTTTCTTGTAACTCTTGTGGTTGTGTTTATACTTCGGGCACCTCGAGGAAGAGTTGGAGATCCTGAACACGAAGTGTCTAACATTGACGATAATGACTTGGAGGAGGAAGTCAAGGAAGGATTGGTAGTTTTGTTCCAAAACAATGACAATGGAAGTCTCTCGCTCGAGGACATTTTGAAATCGACGAATGACTTCGATCAAGAAAATATCATCGGATGTGGGGGTTTTGGTTTAGTTTACAAAGCCAACCTTCCTGACGGTAGAAAGGTCGCTATAAAGCGGTTGTCTGGTGACTGTGGTCAAATGGACAGAGAATTTCGAGCAGAAATCGAAACTCTTTCACGTGCACAGCATCCAAATCTTGTTCTTCTTCAGGGGTATTGTATGTATAAAGCTGAAAGGCTTTTGATTTTTTCTTATATGGAGAATGGTAGCTTAGATTACTGGTTACATGAAAGACCTGATGGCCCATCTTGCCTTGACTGGGATACTAGACTGCAGATTGCTCGGGGGGGCGCCGAGGGGCTGGCCTATTTGCATCAATCCTGCGAACCCCGTATCCTCCATCGAGATATAAAGTCGAGTAACATTCTTTTAGACGAAAATTTTAAAGCTCATTTAGCTGATTTTGGTCTTGCTAGACTCATTCTTCCCAATGCTACCCACATAACAACCGATCTAGTTGGTACCTTGGGCTACATTCCACCCGAGTATGGACAATCCTCAGTTGCGACCTACCAAGGCGATGTGTACAGTTTTGGAGTTGTTCTGTTAGAGCTTTTAACTGGTCAAAGGCCAATCGATATGTGCAGGTCAAAAGGACTTCAAGATTTGGTCTCTTGGGTGTTCGAGATGAGGAATGACAGAAAAATAAGCGAGGTGTTCGATCCATTAATATACGACAAGAAGAACGAGAGGGCAATGGCTGAAGTTCTTGATATAGCATGCCTTTGCTTGTGTAAGGTACCTAAAGAGAGGCCTTCAACACAACAGCTAGTTTCTAGGCTTAATACAGTAAGTTAA 3018 41.78 MAPQSFYSVLLPIFFFLHLHFSSPNPTICHSNDSEALHDFHSTFSSQIDGLLTNCSTKCCTCIGITCDSSGRVVKMELDGRKLIGPLPNSIARLEHLRVLNLSSNSLTGFIPVALFQLPYLEVLDLSFNQFLGSISTGTINLPSLRVLNVSHNSFNGVLPLGVCVNSSRIEVLNLGFNKFIGTIPFQLAECVSLKRLHVESNFIRGGIPDEVSGLRKLTHLFVQNNKLSGFLNSVVGNLTSLVQLDLSSNEFFGEIPDVFYDSVNLSSLVAVSNRFSGKIPNSLSNSPSLTVLNLRNNSIGGTLDLNCSAMTSLVTLDLGTNRFHGSIPSNLPFCTQLSSINLARNKLGGQIPESFRNFQSLSYLSLTNTSIVNVSSALNVLQHCQNLSTVVLTFNFHGEVLGDDPIMHFKSLQVFIIANCGLKGMIPQWLRGSNKLQLLDLSWNHLGGNIPSWFGQFPFLFYLDLSNNSFTGYIPKEMTEIKSFVHRYFSLDDPSSPDFTLFVKKNGSGLQYNQLSRFPPTLNLSLNNLSGPIWPEFGNLKELLVLDLKNNNLSGSIPSSLSGMVSLETLDLSHNNLSGIIPPSLQKLNFLSKFSVAYNHLHGVILKGGQFHTFGKSSFEGNNFCVQDVLCASIDRDPLVPSHKSRMVIWTIICMVIGIVFGIVFLVTLVVVFILRAPRGRVGDPEHEVSNIDDNDLEEEVKEGLVVLFQNNDNGSLSLEDILKSTNDFDQENIIGCGGFGLVYKANLPDGRKVAIKRLSGDCGQMDREFRAEIETLSRAQHPNLVLLQGYCMYKAERLLIFSYMENGSLDYWLHERPDGPSCLDWDTRLQIARGGAEGLAYLHQSCEPRILHRDIKSSNILLDENFKAHLADFGLARLILPNATHITTDLVGTLGYIPPEYGQSSVATYQGDVYSFGVVLLELLTGQRPIDMCRSKGLQDLVSWVFEMRNDRKISEVFDPLIYDKKNERAMAEVLDIACLCLCKVPKERPSTQQLVSRLNTVS 1005
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5257114 5260131 + Carg00094-RA Car04g00919 146344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00919 1005 Pfam Protein kinase domain 731 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00919 1005 ProSitePatterns Protein kinases ATP-binding region signature. 736 758 IPR017441 GO:0005524
Car04g00919 1005 ProSiteProfiles Leucine-rich repeat profile. 567 588 IPR001611 GO:0005515
Car04g00919 1005 Pfam Leucine rich repeat 90 131 IPR001611 GO:0005515
Car04g00919 1005 Pfam Leucine rich repeat 522 578 IPR001611 GO:0005515
Car04g00919 1005 Pfam Leucine rich repeat 193 251 IPR001611 GO:0005515
Car04g00919 1005 ProSiteProfiles Protein kinase domain profile. 730 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00919 1005 Pfam Leucine Rich Repeat 436 456 IPR001611 GO:0005515
Car04g00919 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 852 864 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00004 Car-Chr4:12260 Car04g00919 Car-Chr4:5257114 0 dispersed
Car04g00919 Car-Chr4:5257114 Car16g00368 Car-Chr16:2277473 0 dispersed
Car04g00919 Car-Chr4:5257114 Car16g00121 Car-Chr16:709313 7.64E-26 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88793 PF00069 Pkinase 3.90E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00919 - - bhj:120069286 1650.18