Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00922 ATGAAACTGATGTTAATGAGGTACTCTCCATTCTTCTTCGTCTTGTTGTTCTGTGTACTGCCTCTGGTTCGGGCTGGAGATGAAGAAGCTCTGTTAGCACTGAAAGAATCTCTCGACCCTGGGAACTCGCTTCCATGGCGAGGAAGCTCTGTCTGCCACTGGCAAGGCGTGAAAGAGTGCAAGAATGGGCGGGTAACTAAGCTTGTTTTGGAGCATCTAAATCTCTCTGGCGTTCTTAACCACAAGATTTTGAATCGTTTAGATCAGCTTCGTGTTCTCAGTTTCAAAGGAAATTCACTCTCTGGCCGAATCCCTGATCTCTCAGGTCTTGTTAATCTCAAATCCCTCTATCTTAACGACAACAACTTTTCCGGCGAGTTCCCGAGCTCCATCTCCGATCTCCATCGTTTGAAGGTCGTTGTTCTTTCCGGTAATCAAATATCTGGCCCCATTCCAGACTCGCTGCTCAAACTCCGGCGTCTCTATGTCCTACACCTGCAGGACAACCAACTCACCGGCTCCATCCCACCTTTCAACCAAACCAGTCTCCGATTCTTCAATGTCTCTAACAATCACCTCTCCGGCGACATCCCAGAAACCCCCGCCTTGCTCCGCTTCAATGTCTCGTCATTTTCCGGCAACCTGAAACTTTGCGGAAAACAAGTTCAAAACCCCTGTGGAAATATTGCCATTGCGCCATCATTAAGTCCCTCTTATTCACAAATCCTGAGCTCAAGCTCGTCTTCAAGACACAAAAAAATGGTCAGGATAATAGCAGGAAGCGTTGGTGGGTTTGTCGGGCTGCTATTAATCATTCTTTTATTGTGTATGATTTGCAAATGTAGGGAAAGAGAGAGCCTAGCGGAAGTTAGAAACAAAGGAATCGGCGACGAGGGGATGGGGATGGGGATGGAGGAAACATCTGGAACTGCCGGCGGGAGCAGAGAAGTTAATAACGGGGGAAAGCAAGGGGGATTTTCATGGGAAAGTGAAGGACTAGGGAGTCTAGTGTTCTGCGGAGCAGGGGATCAGAAAATGACTTATAGCTTGGAAGATCTGTTGAAAGCTTCGGCGGAGACTTTGGGCAGAGGGACCATCGGAAGCACATACAAGGCTGTGATGGAATCTGGGTATATTGTGACGGTGAAGCGGCTGAAGGATGCAAGGTACCCACGAGCAGAGGAATTCGGACGGCAGATGGAAGTTCTTGGGCGGCTCAGACACCCCAACTTGGTCCCTCTCAGGGCCTACTTCCAGGCTAAGGAGGAACGCCTTCTCGTATACGATTATTTCCCCAATGGCAGTCTCTTCTCTCTCATCCACGGATCGAGAACTTCAGGCGGAGGAAAGCCTCTTCATTGGACATCCTGCCTCAAAATAGCTGAAGACTTGGCCAGTGGTCTACTCTACATCCACCAGAACCCAGGCTCAATACATGGAAACCTCAAATCCTCAAACGTACTATTAGGATCGGATTTCGAGTCGTGTCTTACTGATTATGGTCTTAACTTATTTCGAGATCCAGATTCGCTCGAAGAACCTAGTGCAACTTCGCTCTTTTACCGAGCTCCCGAATGCCGCGACATCCGTAAGCCAACCACACAACAAGCAGACGTTTATAGTTTTGGTGTTCTTCTGTTGGAGCTTCTTACAGGAAAAACACCCTTCCAAGATCTTGTTCAAGAACATGGCTCCGACATTCCCAAGTGGGTTAGCTCAGTTAGAGAAGAGGAGACGGAGTCTGGGGATGATCCCACGTCTGGGAATGAGGCATCGGAAGAGAAACTTCAAGCTCTTTTGAACATAGCAATGGCTTGTGTTTCACTTATGCCGCAGAACCGACCTACAATGAGGGATGTACTAAAGATGATAAGAGATACAAGAGCAGAGGCTCAAATATCATCCAACAGTAGTGATCATTCACCAGGGAGATGGTCTGATATTGTCCAGAGTTTGCCCAGGGAAGAACATTTAAGCATTTGA 1983 47.86 MKLMLMRYSPFFFVLLFCVLPLVRAGDEEALLALKESLDPGNSLPWRGSSVCHWQGVKECKNGRVTKLVLEHLNLSGVLNHKILNRLDQLRVLSFKGNSLSGRIPDLSGLVNLKSLYLNDNNFSGEFPSSISDLHRLKVVVLSGNQISGPIPDSLLKLRRLYVLHLQDNQLTGSIPPFNQTSLRFFNVSNNHLSGDIPETPALLRFNVSSFSGNLKLCGKQVQNPCGNIAIAPSLSPSYSQILSSSSSSRHKKMVRIIAGSVGGFVGLLLIILLLCMICKCRERESLAEVRNKGIGDEGMGMGMEETSGTAGGSREVNNGGKQGGFSWESEGLGSLVFCGAGDQKMTYSLEDLLKASAETLGRGTIGSTYKAVMESGYIVTVKRLKDARYPRAEEFGRQMEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSRTSGGGKPLHWTSCLKIAEDLASGLLYIHQNPGSIHGNLKSSNVLLGSDFESCLTDYGLNLFRDPDSLEEPSATSLFYRAPECRDIRKPTTQQADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPKWVSSVREEETESGDDPTSGNEASEEKLQALLNIAMACVSLMPQNRPTMRDVLKMIRDTRAEAQISSNSSDHSPGRWSDIVQSLPREEHLSI 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5282794 5287025 + Carg00097-RA Car04g00922 146347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00922 660 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Car04g00922 660 ProSiteProfiles Protein kinase domain profile. 355 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00922 660 Pfam Protein kinase domain 358 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00922 660 MobiDBLite consensus disorder prediction 631 660 - -
Car04g00922 660 Pfam Leucine rich repeat N-terminal domain 26 57 IPR013210 -
Car04g00922 660 MobiDBLite consensus disorder prediction 570 591 - -
Car04g00922 660 MobiDBLite consensus disorder prediction 631 645 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00922 Car18g00926 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00041 Car-Chr4:225321 Car04g00922 Car-Chr4:5282794 0 dispersed
Car04g00922 Car-Chr4:5282794 Car05g01237 Car-Chr5:11570461 1.17E-127 dispersed
Car04g00922 Car-Chr4:5282794 Car03g00870 Car-Chr3:6958315 1.42E-156 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88794 PF00069 Pkinase 5.40E-36 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00922 - - csv:101209119 1140.18