Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00932 ATGGAGCCATCGATCACTCAACTATTTCTTCATCCTTTTTTTCGCCTCTCTTCTTCTTCATATTCCGGCGATCTCGCCGCCGCCAGAAGTGGAGTTGATACGGATTATGTGGCTACTCGATGGTACCGTGCTCCTGAACTCTGTGGTTCTTTTCTCTCAAAGATTCGTAACGAAAAGTCTAAAAGGTATTTGAGTGGCATGAGAAAAAAACATCCAATTCCTCTGTCAAGAAAGTTCCCCAATGCAGATCCACTAGCTCTTCGTTTACTCGAACGTCTGCTCGCATTTGATCCCGATGATCGTCCTTCAGCAGAGGAGGCATTAGCTGATCCATACTTCCATGGACTGGCAAATCTGGAGGATGAACCATCCAGGCAACCCATTTCAAAACTCGAGTTCGAGTTTGAAAGGGGAAAGTTGACACAAGATGATGTCAGAGAGCTTATTTATAGAGAAGGCTACCTTCAAGGTTCTGGGAGTCACTTCTTGTATCCCAGTGGAATTGATCGATTCAAGCGTCAATTTGATAATCTTGAGGAACGTTCCGGTAAAGTTGAGAGAGGCACAGGCAGTCCACTTCTAAGGAAGCATGCCTCCTTGCCTAGGGAGCGAATATATACACCACGAGATGAAGACGATGATCAAAAATGTATATCGGAACGGAGAACTGCAGTGCTTCGAAGCCCTCCTGGACCTGCTTGTTCATTAACTGCTCAGAATGGTTCTGTTCATGTAGATTGCAATAGCTATAACCTGTTGAGGAATGCAATTCTAGCCACTTCATCTCCGCCATTTTTTCCGGCGGAAGCTCTTCCCACCAAATCAGGCTATCTTCCGATCAACCCCACCACCGGCTCCGCCATTTACTTCGCCTTTTACGAAGCCCAAACCCCAATTTCTTCCATCTCAAAAACCCCTCTTCTGATTTGGCTCCAAGGCGGCCCTGGCTGTTCTTCCATGATCGGCAACTTCTTCGAGCTGGGTCCATGGCGGGTCAATTTCCACAAAAAAGAAACCGACCCTGTTTCCCTAATCCCCAATACAGGCTCGTGGAATCGAAGATTTGGGGTTCTATTTCTCGACAATCCAATCGGAACTGGCTTCAGTATTGCAGCAACTAAAGATGAGATCCCTAAAAACCAATACTCTGTTTCTAAGCATCTTTTTTCTGCAATTTCTTCGTTTATCGAGCAGGATATTACGTTTAAGAATCGACCCATTTACATAACAGGGGAGAGCTATGCAGGGAAATATGTTCCCTCAATTGGGTATTACATTTTGAAGAAAAACCCCAAATTACCTGTTGATAAGAGGCTCAATTTAGCTGGTGTAGCCATTGGAAATGGGCTAACAGATCCCATTACTCAAGTAGCCACTCATGCGTTGAATGCTTACTATTCTGGGCTGATTAACGAAAGGCAAAAAAAGGAAATGGAAATCGCTCAATTGGAGGCTGTGGAGCTCACTAAAAAGGGGAATTGGAGTGAGGCCACAAATGCAAGGAGTAAGGTCTTGAATTTGCTCAAGAACATGACAGGATTAGCCACTCTGTATGATTATACAAGAAAATCTCCTTATAATTCTGAATTGGTAGCTGAGTTCTTGAGCTTCAAGGAGGTGAAGAGGGCATTGGGAGTGAATGAGTCCATGGTTTTCGAAGAGTGTAGCGATCTTGTTGGGGAGGTTTTGAAAGATGATGTGATGAAGAGTATGAGATATAAGGTTGATTATCTGGTGAAGAACAGTAAGGTCTTGGTTTACCAAGGGCAGTTTGATTTGAGGGACGGCGTGGTTTCAACGGAGGCTTGGTTGAAGAAGGTGAAATGGGGTGAGATTGAGAGGTTTTTGGGAGCTGACAGAAAGATTTGGCGTGTTGGAGATGAGTTAGCTGGTTATGTTCAGACATGGAAGAGTTTGAGCAATGCTGTCGTGTTGGGAGCTGGTCATCTTGTTCCTTCTGATCAAGCTTTGAACTCTCAAGCAATGATTGAAGATTGGGTGTTGGAGAAGGGAGTTTTTGGTGATGATAACTCAGAAGAGAAGAGGCCTTTTGGTGCTAATGATTTTGGGGTTTGGTGA 2079 44.44 MEPSITQLFLHPFFRLSSSSYSGDLAAARSGVDTDYVATRWYRAPELCGSFLSKIRNEKSKRYLSGMRKKHPIPLSRKFPNADPLALRLLERLLAFDPDDRPSAEEALADPYFHGLANLEDEPSRQPISKLEFEFERGKLTQDDVRELIYREGYLQGSGSHFLYPSGIDRFKRQFDNLEERSGKVERGTGSPLLRKHASLPRERIYTPRDEDDDQKCISERRTAVLRSPPGPACSLTAQNGSVHVDCNSYNLLRNAILATSSPPFFPAEALPTKSGYLPINPTTGSAIYFAFYEAQTPISSISKTPLLIWLQGGPGCSSMIGNFFELGPWRVNFHKKETDPVSLIPNTGSWNRRFGVLFLDNPIGTGFSIAATKDEIPKNQYSVSKHLFSAISSFIEQDITFKNRPIYITGESYAGKYVPSIGYYILKKNPKLPVDKRLNLAGVAIGNGLTDPITQVATHALNAYYSGLINERQKKEMEIAQLEAVELTKKGNWSEATNARSKVLNLLKNMTGLATLYDYTRKSPYNSELVAEFLSFKEVKRALGVNESMVFEECSDLVGEVLKDDVMKSMRYKVDYLVKNSKVLVYQGQFDLRDGVVSTEAWLKKVKWGEIERFLGADRKIWRVGDELAGYVQTWKSLSNAVVLGAGHLVPSDQALNSQAMIEDWVLEKGVFGDDNSEEKRPFGANDFGVW 692
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5344755 5349481 + Carg00107-RA Car04g00932 146357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00932 692 ProSitePatterns Serine carboxypeptidases, serine active site. 409 416 IPR018202 GO:0004185
Car04g00932 692 ProSitePatterns Serine carboxypeptidases, histidine active site. 639 656 IPR033124 GO:0004185
Car04g00932 692 Coils Coil 466 491 - -
Car04g00932 692 Pfam Serine carboxypeptidase 272 667 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00465 Car-Chr1:2716237 Car04g00932 Car-Chr4:5344755 6.38E-49 dispersed
Car04g00932 Car-Chr4:5344755 Car11g00281 Car-Chr11:1535991 1.26E-70 dispersed
Car05g00649 Car-Chr5:3997506 Car04g00932 Car-Chr4:5344755 8.00E-36 transposed
Car05g00677 Car-Chr5:4320013 Car04g00932 Car-Chr4:5344755 1.38E-26 transposed
Car20g00474 Car-Chr20:2628199 Car04g00932 Car-Chr4:5344755 1.34E-30 transposed
Car04g00047 Car-Chr4:248661 Car04g00932 Car-Chr4:5344755 8.54E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00932 K09645 - csv:101205133 748.429