Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00948 ATGACGAAGTCCAAGAGTATGTTACACAACCTCATGAGACCATTCAGATTCGGTTCATCAAGAGATAGCCAGGGCGAGGACGATTTGGAGCAGATTGCAGCTAATGAACAGAAGTTTTTTCGGTTCGAAACCTTAGTTGAAGCTACCAACAATTTCCACCCCACGAACAAGCTTGGCCAAGGCGGATTTGGTCCAGTTTTCAAGGGGAAGTTAAAGGATGGAAGAGTGATTGCAGTTAAGAAGTTGTCACAATATTCAAAACAAGGAAAAAAAGAGTTTATGACTGAGGCCAAATTGTTGGCTCGTGTGCAGCACAGAAATGTTGTCAATTTGTTGGGTTACTGTGTGCATGGTTCAGAAAAATTACTGGTTTACGAATACGTCACGAATGAGAGCCTCGACAAGCTTCTCTTTACAGAAGCCAGCAGACGAGGAGAACTTGATTGGAAGATGAGGTATGGCATAATCTTTGGCGTAGCACGAGGGTTGCAATATCTTCATGTAGACTCACATAATGTCATTATCCATCGTGACATTAAGGCCGGTAACGTTTTGTTGGATGATAAATGGGTCCCTAAGATTGCGGATTTCGGTATGGCTCGTCTCTTCCCGGAAGATCAAACTCATGTCAATACTCGTGTTTCTGGTACAAACGGGTATATGGCTCCCGAATATGTAATGCACGGGCATCTATCTGCGAAGGCAGATGTATTTAGCTTTGGTGTTTTAGTGTTGGAGCTTATCAGTGGCCAGCGAAACTCGTTATCATCTGGTTTATTTATGGACGCCGAAAATTTACTAGATTGGGCTTACAAGCTTTACAAGAAAGGCAGGAGCTTGGAGATCATGGACCCAACTTTAGCATCATCAGCTGATCCTGACCAAGTTACAATGTGCACTCAGATAGGATTGCTTTGCACACAAGGCGATCCGCACCTACGGCCGACCATGCCACATGTAGTTTTGACCCTGTCGAGGAGACCTGGTACTTTGGAGGAACCAACAAGACCGGGAATGCCTGGTTCTCGATATAGAAGAACACGTAGGACAAGCGTATCGTCCTCCAATGCTGGAACTTCTGGTGCATCCGATTCCTATGCTTCGACGACCAATACTACTGGAACTATTACTGCAACGGCAACTGCAACTGCAACTGCAAATGAGATTGCTTCTGGTTCTTCTTCAGTTAGTCAAGGATACGTTACTCGTGGGAAAACTATTACCGCAACCGAAAACGAAATTGCTTCTGGTTCTTCTTCAGTTAGTCAAGGATACGATACTCGTGGGAAACGTCCCATGGAAGGTTAG 1308 44.72 MTKSKSMLHNLMRPFRFGSSRDSQGEDDLEQIAANEQKFFRFETLVEATNNFHPTNKLGQGGFGPVFKGKLKDGRVIAVKKLSQYSKQGKKEFMTEAKLLARVQHRNVVNLLGYCVHGSEKLLVYEYVTNESLDKLLFTEASRRGELDWKMRYGIIFGVARGLQYLHVDSHNVIIHRDIKAGNVLLDDKWVPKIADFGMARLFPEDQTHVNTRVSGTNGYMAPEYVMHGHLSAKADVFSFGVLVLELISGQRNSLSSGLFMDAENLLDWAYKLYKKGRSLEIMDPTLASSADPDQVTMCTQIGLLCTQGDPHLRPTMPHVVLTLSRRPGTLEEPTRPGMPGSRYRRTRRTSVSSSNAGTSGASDSYASTTNTTGTITATATATATANEIASGSSSVSQGYVTRGKTITATENEIASGSSSVSQGYDTRGKRPMEG 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5460460 5463286 - Carg00123-RA Car04g00948 146373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00948 435 MobiDBLite consensus disorder prediction 407 426 - -
Car04g00948 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Car04g00948 435 MobiDBLite consensus disorder prediction 324 371 - -
Car04g00948 435 ProSiteProfiles Protein kinase domain profile. 52 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00948 435 MobiDBLite consensus disorder prediction 346 371 - -
Car04g00948 435 Pfam Protein tyrosine and serine/threonine kinase 55 322 IPR001245 GO:0004672|GO:0006468
Car04g00948 435 MobiDBLite consensus disorder prediction 407 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00948 Car-Chr4:5460460 Car09g00824 Car-Chr9:5016207 4.13E-98 dispersed
Car04g00063 Car-Chr4:335426 Car04g00948 Car-Chr4:5460460 7.81E-164 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88795 PF07714 PK_Tyr_Ser-Thr 5.80E-48 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00948 - - cmax:111486649 811.216