Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00954 ATGACTGAACTCTCGACTCTGTCATCGAGCCTCAGCGGAGAAGGGAACAACGTGCTGCAGAAACACGTGGCGTTCTTCGATAGGAACAAAGATGGGGTGGTTTATCCATGGGAGACCTTCAAGGGCTTCCGAGCAATTGGCGCCAATTTCCTATTGTCCGCCGTCGCCGCCGTTTTTATTAACGTTGGACTCAGCTCTAAAACCCGACCGGGGAAATTTCCAAATTTGATGTTCCCAATTGAGATAAAGAACATCCAACTTGCCAAACATGGAAGTGATTCTGGCGTATATGATCAACAGGGAAGATTTGTTGGTACAAAATTTGAAGAAATATTTGGGAAGCATGCCTTAACCTACCCGGATGCCTTGACGGAAGAAGAGGTGAAAGGCTTGCTAAAGAGAAATAGAGAACCTAAAGACTACGGTGGATGGGTTGGTGCATGGGCAGAATGGACAATTCTGTACAGTCTTTGCAAAGATGAGAATGGCTTGCTTCAGAAGCAAACTGTGAAGGCTGTTTATGATGGAAGCTTATTTGAAGACATGGAGAAAGAGAGAGCATCAAAAAACAAGAAATGA 579 44.73 MTELSTLSSSLSGEGNNVLQKHVAFFDRNKDGVVYPWETFKGFRAIGANFLLSAVAAVFINVGLSSKTRPGKFPNLMFPIEIKNIQLAKHGSDSGVYDQQGRFVGTKFEEIFGKHALTYPDALTEEEVKGLLKRNREPKDYGGWVGAWAEWTILYSLCKDENGLLQKQTVKAVYDGSLFEDMEKERASKNKK 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5497936 5499475 - Carg00129-RA Car04g00954 146379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00954 192 Pfam Caleosin related protein 16 182 IPR007736 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00954 Car04g00068 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00954 Car-Chr4:5497936 Car17g00126 Car-Chr17:772639 1.46E-57 dispersed
Car04g00068 Car-Chr4:360528 Car04g00954 Car-Chr4:5497936 4.34E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00954 K17991 - csv:101213829 313.153