Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00999 ATGGATCTTGAGCATGGGAAGTGTTGGGATACTTCAAAGAAGGATTCTTGGAAAACGGTTCTTGTATTGGCCTATCAAAGCCTTGGTGTCGTCTATGGCGATTTAAGCATCTCTCCCCTCTACGTTTACAGAAGCACTTTTGCAGAAGACATCCAACATTCAGATACTAATGAAGAAATCTATGGTGTTCTTTCATTTGTCTTCTGGACTCTCACTATAGTTCCCCTTTTCAAGTATGTCTTTGTGGTTCTTAGAGCTGATGACAATGGTGAAGGTGGAACTTTTGCTCTGTACTCGTTAATTTGCAGACATGCCAAAGTAAGCCTTCTCCCCAACAAACAAGTTGCAGATGAAGCTCTTTCCACTTACTTGCTAGAACATCCACCGGAGAAGAAGAAGCAATCTAAGGTTAAATTGTTGCTGGAGAAGCACAGAGCTCTTCACACTGCCTTGTTGATTCTTGTTCTTCTAGGAACTTGTATGGTTATTGGAGATGGGCTCCTCACTCCTGCCATTTCTGTCTTTTCAGCAGTTTCTGGACTTGAGTTATCCATGACCAAGGCACACCATCAGTATGCAGTGGTTCCAATCACTTGTTTTATCTTGGTTTGTCTATTTGCACTTCAACACTATGGGACACATCGAGTCGGCTTCGTCTTTGCTCCCATTGTATTGACTTGGCTACTCTGCATCAGTACCCTTGGCTTATACAATATTATACACTGGAATCCACATGTTTATCGAGCTCTTTCTCCGTATTACATGTTCAAGTTTTTGGAGAAAACGAGGAAGAGCGGTTGGATGTCGTTGGGGGGTATATTGTTGTGCATAACAGGCTCAGAAGCAATGTTTGCTGATCTTGGTCACTTCTCATACACTGCAATACAGATTGCTTTCACTTTTCTGGTGTATCCAGCGCTTATATTAGCATACATGGGCCAAGCTGCTTACTTATCACAGCATCACCATACCACCAAAAACATTGGCTTCTATGTTTCCGTTCCAGAGAGTGTGAGGTGGCCAGTGCTTACAATTGCTATACTTGCTTCGGTTGTGGGAAGCCAAGCAATCATCAGTGGAACATTCTCCATTATTAACCAGAGCCAGTCCCTTGGTTGCTTCCCTAGAGTGAAGGTCGTTCATACCTCTGATAAGATCCATGGCCAAATCTACATTCCAGAGATCAACTGGATTCTTATGATTCTCTGTGTTGCTGTTACCATCGGATTTAGAGACATAAAACACCTCGGAAATGCTTCAGGTCTAGCCGTAATGACTGTGATGTTGGTGACAACATGTCTTACATCTTTGGTGATTGTTCTCTGTTGGAACAAATCCCCACTTTTGGCTCTCTCCTTCTTGATCTTCTTTGGATCTGTTGAACTGCTCTACTTCTCTGCTTCACTCACCAAGTTCAGGGAGGGCGCTTGGCTCCCCATTCTTTTAGCTCTCTTCCTCATGACCATTATGTTTGTATGGCACTTTGCCACCATCAAGAAGTATGAATTTGATCTTCACAACAAGGTTTCATTAGAATGGTTACTAGCATTGGGGCCGAGCCTTGGGATTGCTCGTGTCCCGGGCATTGGATTAGTTTTCACTGATCTTACCTCAGGCATCCCTGCCAACTTCTCCCGGTTTGTCACCAATCTCCCGGCATTTCATCGCATTCTTGTCTTTGTATGTATAAAGTCGGTACCGGTTCCTTTTGTACCTCCAGCTGAGCGATATCTCGTCGGAAGAGTAGGCCCAGCTACACATCGGTCGTACAGGTGCATTGTTCGATATGGCTACCGTGATGTTCACCAGGATGTGGACTCATTTGAATCGGAATTAGTCAAGAAACTGGCAGACTTCATCCGTTATGATTGGTACAGAAAGCAAAGAGGCAACTCTTGCAGCGAGGACGATGCATCCCATTCAAATGACTCAACGGGCGAGTGTCGACTGGCTGTGATTGGAACCATAGCATTTGCAGATGCAACTGCTTATGAAGAAACTGTGCAACCTGGAAGTGTATCGGTCGGGTTCCGAACTGTCGATAGCATTGGTGATGTGATCGAAATGGAGCCAATGGGAGAAGAACGAAGAGTCAGGTTTGCTATAGATGATGATGATGATTTTGAAGGTGACTCACAAGCTGAAACAGAAGCCTTGCTGCATGAAGAGCTAGAAGACCTTGTAGCAGCACAGCAATCTGGGACAGCGTTCATTCTCGGGCATTCGCACGTGCGGGCGAAGCAAGGATCGTCTGTGTTGAAGAGGCTGGCTATTAACTATGGCTACAACTTTCTGAGAAGGAATTGCAGAGGCGCAGATGTTGCACTTAAGGTGCCACCAGTGTCTCTTCTTGAAGTGGGCATGGTTTATGTTGTATAA 2379 44.77 MDLEHGKCWDTSKKDSWKTVLVLAYQSLGVVYGDLSISPLYVYRSTFAEDIQHSDTNEEIYGVLSFVFWTLTIVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNKQVADEALSTYLLEHPPEKKKQSKVKLLLEKHRALHTALLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMTKAHHQYAVVPITCFILVCLFALQHYGTHRVGFVFAPIVLTWLLCISTLGLYNIIHWNPHVYRALSPYYMFKFLEKTRKSGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSQHHHTTKNIGFYVSVPESVRWPVLTIAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWILMILCVAVTIGFRDIKHLGNASGLAVMTVMLVTTCLTSLVIVLCWNKSPLLALSFLIFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMFVWHFATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCIKSVPVPFVPPAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFESELVKKLADFIRYDWYRKQRGNSCSEDDASHSNDSTGECRLAVIGTIAFADATAYEETVQPGSVSVGFRTVDSIGDVIEMEPMGEERRVRFAIDDDDDFEGDSQAETEALLHEELEDLVAAQQSGTAFILGHSHVRAKQGSSVLKRLAINYGYNFLRRNCRGADVALKVPPVSLLEVGMVYVV 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5743448 5747947 + Carg00175-RA Car04g00999 146424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00999 792 Pfam K+ potassium transporter 25 600 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00999 Car-Chr4:5743448 Car05g00002 Car-Chr5:9120 0 dispersed
Car14g00707 Car-Chr14:3940333 Car04g00999 Car-Chr4:5743448 5.68E-26 dispersed
Car04g00105 Car-Chr4:572522 Car04g00999 Car-Chr4:5743448 5.37E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00999 K03549 - csv:101211022 1493.79