Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01004 ATGGGAGCTTCTAGCCTCGCTTGTTTTTCATCGCTATTTGCAGTTTTTCCATCTCATAATAATGCGCACAACAAACCCTTACCATTTTGTTCAAATCCCTCAAAACCCCTCTTCCGATTGAACAAGATCCGCTGCGGACTGCCTGAGAGTGGAATTCGGCAAAACCCCTCAAGTTCCAGAGCTTCCTCTTCCAAGAACAGGATGGAGGAGTACAATTTGGCTATGAAGAAGATGATGAGGAATCCATATGAGTATCACCATGAACTCGGTATGAACTATACTGTGATAGCTGACAATTTGATCGTCGGTTCCCAGCCTCAGAAACCGGAAGATATCGATTTCCTGAAGGAGGAAGAAGGTGTTGCCTATATTCTAAATTTACAGCAGGATAAGGATGTCGAGTACTGGGGAATCGACTTACAGTCGGTTATAGAAAGATGTAAAGAACTTGGAATTCATCATATGAGGCAACCGGCAAAGGATTTCGATCCAGACTCCCTGAGAAATGGATTGCCCAAAGCTGTTTCCTTGTTAGAATGGGCGATTTCGGAGGGTAAAGGAAAAGCTTACGTGCATTGCACCGCTGGATTAGGCAGGGCCCCTGCCTTGAATACAGCATATGAAGCACTGACTTCAAAAAGACCTTGTGGACCAAGTAAAAAAGCCATCCGCGGAGCCACATACGATCTATCGAAAAATGATCCAGGGAAGGAGCCATTCGAGAGCCTTCCAGATAACGCATTCGAGGATATCGCAGATTGGGAGAGAAACTTGATTCAGGATCGGGTCCGTTCCCTCCGACGAACTTGA 810 45.68 MGASSLACFSSLFAVFPSHNNAHNKPLPFCSNPSKPLFRLNKIRCGLPESGIRQNPSSSRASSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDIDFLKEEEGVAYILNLQQDKDVEYWGIDLQSVIERCKELGIHHMRQPAKDFDPDSLRNGLPKAVSLLEWAISEGKGKAYVHCTAGLGRAPALNTAYEALTSKRPCGPSKKAIRGATYDLSKNDPGKEPFESLPDNAFEDIADWERNLIQDRVRSLRRT 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5767060 5770132 + Carg00180-RA Car04g01004 146429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01004 269 Coils Coil 61 81 - -
Car04g01004 269 Pfam Dual specificity phosphatase, catalytic domain 115 207 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01004 Car-Chr4:5767060 Car04g01476 Car-Chr4:8569215 1.21E-34 dispersed
Car04g01004 Car-Chr4:5767060 Car18g00844 Car-Chr18:9435129 5.42E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01004 - - csv:101219662 483.796