Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car04g01040 | ATGGCGTCAATCTCTTCCAGCCTTCGCACCGTCGAAGATATCTTCAAGGATTACAACGCTCGACGCACAGGCCTTGTGCGAGCCCTCACTTATGATGTTGATATGTTCTACTCGCTTTGCGATCCTGAGAAGGAGAATCTGTGTTTGTATGGACATCCGGATGAGTCTTGGGAGGTGACTTTGCCTGCCGAGGAAGTTCCATCCGAGCTCCCTGAGCCCGCGTTGGGTATCAATTTTGCAAGAGATGGGATGAAGCGCAGAGACTGGCTTTCGCTGGTGGCTGTGCACAGCGATTGTTGGTTGCTTTCAGTGGCGTTCTATTTTGGTGCTCGACTCAACCGCAATGAGCGGAAGCGGCTGTTTAGTATGATTAATGATCTACCCACTCTCTTTGAAGTTGCGTCTGGAAGGAAAGCTGTTAAAGACAAACCCAGTATGGACAGTGGAAGTAAATCCAGAAACAGCACAAAGAGATCACTGGATGGGTCGATTAGAAACAGCAATCCAAAGCTACTGGATGAGAATAGAGAGTTTTGGGTGTATTATTGGGATACCTTTGGGTAG | 564 | 48.23 | MASISSSLRTVEDIFKDYNARRTGLVRALTYDVDMFYSLCDPEKENLCLYGHPDESWEVTLPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGARLNRNERKRLFSMINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRSLDGSIRNSNPKLLDENREFWVYYWDTFG | 187 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 5967203 | 5975072 | - | Carg00217-RA | Car04g01040 | 146465 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car04g01040 | 187 | MobiDBLite | consensus disorder prediction | 141 | 166 | - | - | |
| Car04g01040 | 187 | MobiDBLite | consensus disorder prediction | 149 | 166 | - | - | |
| Car04g01040 | 187 | Pfam | Alfin | 10 | 135 | IPR021998 | GO:0006355|GO:0042393 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car04g01040 | Car-Chr4:5967203 | Car17g00661 | Car-Chr17:6128488 | 8.57E-61 | dispersed | |
| Car14g00046 | Car-Chr14:276804 | Car04g01040 | Car-Chr4:5967203 | 4.01E-88 | wgd | |
| Car04g00146 | Car-Chr4:800314 | Car04g01040 | Car-Chr4:5967203 | 1.98E-116 | wgd | |
| Car04g01040 | Car-Chr4:5967203 | Car06g00201 | Car-Chr6:1192735 | 6.35E-75 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car04g01040 | - | - | csv:101211934 | 338.961 |