Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01040 ATGGCGTCAATCTCTTCCAGCCTTCGCACCGTCGAAGATATCTTCAAGGATTACAACGCTCGACGCACAGGCCTTGTGCGAGCCCTCACTTATGATGTTGATATGTTCTACTCGCTTTGCGATCCTGAGAAGGAGAATCTGTGTTTGTATGGACATCCGGATGAGTCTTGGGAGGTGACTTTGCCTGCCGAGGAAGTTCCATCCGAGCTCCCTGAGCCCGCGTTGGGTATCAATTTTGCAAGAGATGGGATGAAGCGCAGAGACTGGCTTTCGCTGGTGGCTGTGCACAGCGATTGTTGGTTGCTTTCAGTGGCGTTCTATTTTGGTGCTCGACTCAACCGCAATGAGCGGAAGCGGCTGTTTAGTATGATTAATGATCTACCCACTCTCTTTGAAGTTGCGTCTGGAAGGAAAGCTGTTAAAGACAAACCCAGTATGGACAGTGGAAGTAAATCCAGAAACAGCACAAAGAGATCACTGGATGGGTCGATTAGAAACAGCAATCCAAAGCTACTGGATGAGAATAGAGAGTTTTGGGTGTATTATTGGGATACCTTTGGGTAG 564 48.23 MASISSSLRTVEDIFKDYNARRTGLVRALTYDVDMFYSLCDPEKENLCLYGHPDESWEVTLPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGARLNRNERKRLFSMINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRSLDGSIRNSNPKLLDENREFWVYYWDTFG 187
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 5967203 5975072 - Carg00217-RA Car04g01040 146465
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car04g01040 187 MobiDBLite consensus disorder prediction 141 166 - -
Car04g01040 187 MobiDBLite consensus disorder prediction 149 166 - -
Car04g01040 187 Pfam Alfin 10 135 IPR021998 GO:0006355|GO:0042393
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01040 Car-Chr4:5967203 Car17g00661 Car-Chr17:6128488 8.57E-61 dispersed
Car14g00046 Car-Chr14:276804 Car04g01040 Car-Chr4:5967203 4.01E-88 wgd
Car04g00146 Car-Chr4:800314 Car04g01040 Car-Chr4:5967203 1.98E-116 wgd
Car04g01040 Car-Chr4:5967203 Car06g00201 Car-Chr6:1192735 6.35E-75 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01040 - - csv:101211934 338.961