Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01049 ATGGCCTTTTTCTTTTTTCTCCTCTTCTTTTCCTCTGTTTTCGCCTCTTCTCTCTTTCTCTTCCTCTTTCTCCGCCCGGCGAGATTCCGGCGTGTCAGGCTGCCACCGGGGACACTCGGCCTTCCCTTCATCGGAGAGTCTCTTCAACTCATCTCCGCTTACAAGACCGAGAACCCGGAACCCTTCATCGACGAGCGTGTCCGACGATTCGGACCGGTTTTTACAACCCACGTGTTTGGAGAGCCGACGGTTTTCTCGGCGGATTGGGAGACGAACCGGTTCATTCTTCAGAATGAGGAGAAGCTTTTCGAGTGCAGCTACCCGGGTTCGATTTCCAACCTGCTTGGGAAGCACTCTTTGTTGGTGATGAAAGGGAGTTTACATAAGAGAATGCATTCTTTGACTATGAGCTTCGGGAATTCTTCCATTATTAGGGATCATCTTTTGGTCGATGTGGACCGGTTGATTCGCCTCAATTTGGAGTCTTGGACCGGCCGGATCTTCCTCATGGAGGAGGCTAAGAAGATAACGTTTGAGTTAGCAGTGAAGCAATTGATGAGCTTTGATCGGTGTGAATGGACTCAAAATCTGATGAAAGAATACCTTCTTGTCATCGAAGGCTTTTTTACCGTCCCTTTCCCTCTCTTCTCCTCTACTTACCGTCGAGCCATCCAGGCACGTGAGAAAGTGGCGGAGCAATTGGGGACGGTGGTGCGGCAGCGGAGGAAAGAGAGCAAGGAGGGAGAGAGGAAGAAGGACATGCTTGGAGCGCTCCTCGCCGGAGAAGACGCCCTCTCCGACGACCAAATAGTCGATTTCTTATTGGCTCTACTGGTCGCTGGATATGAAACCACGTCAACCACCATGACCCTCGCCGTCAAGTTTCTCACGGAGACGCCGCTGGCTTTGGCCCAATTACAGGAAGAGCACCACCAAATCAAAGCAAGGAACAAGCAATCACACCAACGCCTTCAATGGAATGATTACAAGTCCATGCCTTTCACCCAATGTGTTGTCAATGAAACATTACGAGTTGCCAACATCATCAGTGGCGTGTTTAGGAGGGCAATCACCGACGTCAATATCAAAGGATACACAATTCCAAAGGGATGGAAGGTTTTTGCGTCATTTCGTGCCGTACATTTGGACCACGATCACTTCAAAGATGCTCGCTCTTTTAACCCATGGAGATGGCAAAAGACTAGCTCCGGCTCCACCACGCTTAATGCTTTTACGCCCTTCGGAGGAGGTCCCAGACTATGCCCTGGTTATGAGCTTGCCAGAGTCGAGCTCTCTGTTTTCCTTCATCATCTCGTCACTCAATTCAGTTGGGTTCCAGCAGAAGATGATAAGTTGGTATTTTTCCCAACAACAAGAACACAGAAGCGCTATCCAATCTATGTGACGCGGAAGAATGACACTACACACTCATCCACCACACACATCAAGGGAGGCGAGGCAAGTCGAGTCGAGTCAGGTTTCAATATGTAG 1491 49.63 MAFFFFLLFFSSVFASSLFLFLFLRPARFRRVRLPPGTLGLPFIGESLQLISAYKTENPEPFIDERVRRFGPVFTTHVFGEPTVFSADWETNRFILQNEEKLFECSYPGSISNLLGKHSLLVMKGSLHKRMHSLTMSFGNSSIIRDHLLVDVDRLIRLNLESWTGRIFLMEEAKKITFELAVKQLMSFDRCEWTQNLMKEYLLVIEGFFTVPFPLFSSTYRRAIQAREKVAEQLGTVVRQRRKESKEGERKKDMLGALLAGEDALSDDQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQEEHHQIKARNKQSHQRLQWNDYKSMPFTQCVVNETLRVANIISGVFRRAITDVNIKGYTIPKGWKVFASFRAVHLDHDHFKDARSFNPWRWQKTSSGSTTLNAFTPFGGGPRLCPGYELARVELSVFLHHLVTQFSWVPAEDDKLVFFPTTRTQKRYPIYVTRKNDTTHSSTTHIKGGEASRVESGFNM 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6014161 6018171 - Carg00226-RA Car04g01049 146474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01049 496 Pfam Cytochrome P450 209 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01049 496 SUPERFAMILY Cytochrome P450 28 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01049 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Car04g01049 496 PANTHER CYTOCHROME P450 26 12 470 - -
Car04g01049 496 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01049 496 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01049 496 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01049 496 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01049 496 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01049 496 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01049 496 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01049 496 Coils Coil 303 323 - -
Car04g01049 496 Gene3D Cytochrome P450 24 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01049 496 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01049 496 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01049 496 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01049 496 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01049 496 MobiDBLite consensus disorder prediction 475 496 - -
Car04g01049 496 PANTHER CYTOCHROME P450 90A1 12 470 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00725 Car-Chr4:4201944 Car04g01049 Car-Chr4:6014161 9.31E-96 dispersed
Car04g01049 Car-Chr4:6014161 Car04g02708 Car-Chr4:20966689 7.07E-101 dispersed
Car16g00968 Car-Chr16:8080801 Car04g01049 Car-Chr4:6014161 6.20E-84 dispersed
Car17g00687 Car-Chr17:6316904 Car04g01049 Car-Chr4:6014161 2.61E-56 dispersed
Car18g00107 Car-Chr18:581199 Car04g01049 Car-Chr4:6014161 6.16E-75 dispersed
Car19g00458 Car-Chr19:6287688 Car04g01049 Car-Chr4:6014161 8.79E-86 dispersed
Car04g01049 Car-Chr4:6014161 Car14g01120 Car-Chr14:9901423 5.92E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01049 K09588 - csv:101216594 843.958